Mercurial > repos > devteam > xy_plot
diff r_wrapper.sh @ 4:ecb437f1d298 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-devteam/tree/master/tools/xy_plot commit d792f43f02cd0d6ab74411c21e0897937cb075aa
author | devteam |
---|---|
date | Sun, 17 Dec 2017 12:37:44 -0500 |
parents | 319fa5a9fc1b |
children |
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--- a/r_wrapper.sh Wed Dec 07 18:29:23 2016 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,23 +0,0 @@ -#!/bin/sh - -### Run R providing the R script in $1 as standard input and passing -### the remaining arguments on the command line - -# Function that writes a message to stderr and exits -function fail -{ - echo "$@" >&2 - exit 1 -} - -# Ensure R executable is found -which R > /dev/null || fail "'R' is required by this tool but was not found on path" - -# Extract first argument -infile=$1; shift - -# Ensure the file exists -test -f $infile || fail "R input file '$infile' does not exist" - -# Invoke R passing file named by first argument to stdin -R --vanilla --slave $* < $infile