Mercurial > repos > dktanwar > dktanwar

changeset 4:b725dac6f94c draft

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Uploaded
author dktanwar
date Mon, 16 Oct 2017 10:21:55 -0400
parents 5fe8357cf141
children 7525c61b6e6e
files 01_mismatch_removal/mismatchRemovalSam.xml
diffstat 1 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
--- a/01_mismatch_removal/mismatchRemovalSam.xml	Mon Oct 16 10:21:15 2017 -0400
+++ b/01_mismatch_removal/mismatchRemovalSam.xml	Mon Oct 16 10:21:55 2017 -0400
@@ -6,6 +6,7 @@
     ]]></command>
     <inputs>
         <param type="data" name="input1" format="sam" />
+	<param type="integer" name="SNPs/ mismatches allowed" value="3" />
     </inputs>
     <outputs>
         <data name="output1" format="sam" />
@@ -17,8 +18,7 @@
         </test>
     </tests>
     <help><![CDATA[
-        This program will remove mismatches from sam file.
-Usage: mismatchRemovalSam test.sam 3
+        /bin/sh: mismatchRemovalSam: command not found
 
     ]]></help>
     <citations>