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changeset 5:7525c61b6e6e draft default tip

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Uploaded
author dktanwar
date Mon, 16 Oct 2017 10:35:44 -0400
parents b725dac6f94c
children
files 01_mismatch_removal/mismatchRemovalSam.xml
diffstat 1 files changed, 1 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/01_mismatch_removal/mismatchRemovalSam.xml	Mon Oct 16 10:21:55 2017 -0400
+++ b/01_mismatch_removal/mismatchRemovalSam.xml	Mon Oct 16 10:35:44 2017 -0400
@@ -2,7 +2,7 @@
     <requirements>
     </requirements>
     <command detect_errors="exit_code"><![CDATA[
-        mismatchRemovalSam "$input1" 3 > "$output1"
+        bash $__tool_directory__/mismatchRemovalSam "$input1" 3 > "$output1"
     ]]></command>
     <inputs>
         <param type="data" name="input1" format="sam" />