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author dktanwar
date Tue, 24 Oct 2017 07:06:17 -0400
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1 <tool id="tmpnt" name="None" version="0.1.0">
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2 <requirements>
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3 <requirement type="package">R</requirement>
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4 <requirement type="package">bioconductor-edgeR</requirement>
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5 <requirement type="package">bioconductor-limma</requirement>
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6 <requirement type="package">r-getopt</requirement>
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7 </requirements>
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8 <command detect_errors="exit_code"><![CDATA[
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9 Rscript tmpnt.R --input $input --output $output
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10 ]]></command>
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11 <inputs>
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12 <param type="data" name="input" format="txt" />
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13 </inputs>
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14 <outputs>
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15 <data name="output" format="txt" />
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16 </outputs>
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17 <tests>
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18 <test>
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19 <param name="input" value="input.txt"/>
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20 <output name="output" file="output.txt"/>
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21 </test>
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22 </tests>
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23 <help><![CDATA[
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24 Fill in help.
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25 ]]></help>
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26 <citations>
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27 <citation type="doi">10.1186/gb-2010-11-8-r86</citation>
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28 </citations>
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29 </tool>