Mercurial > repos > erick-antezana > onto-toolkit
comparison onto-toolkit/README @ 0:4484575e4186
Migrated tool version 0.1 from old tool shed archive to new tool shed repository
| author | erick-antezana |
|---|---|
| date | Tue, 07 Jun 2011 17:51:45 -0400 |
| parents | |
| children | d2d26d330236 |
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| 1 README | |
| 2 ====== | |
| 3 | |
| 4 ONTO-Toolkit is a collection of Galaxy tools for managing ontologies | |
| 5 that are represented in the OBO flat file format (spec 1.2). | |
| 6 | |
| 7 Those tools are basically wrappers around the most commonly used tasks | |
| 8 provided by the ONTO-PERL suite. | |
| 9 | |
| 10 See also: | |
| 11 | |
| 12 ONTO-PERL: An API supporting the development and analysis of bio-ontologies | |
| 13 Antezana E, Egana M, De Baets B, Kuiper M, Mironov V. | |
| 14 Bioinformatics 2008; doi: 10.1093/bioinformatics/btn042 | |
| 15 | |
| 16 For installing this collection of tools: | |
| 17 | |
| 18 see the file INSTALL | |
| 19 | |
| 20 DEPENDENCIES | |
| 21 ============ | |
| 22 | |
| 23 ONTO-Toolkit requires: | |
| 24 | |
| 25 1. Galaxy (latest version is recommended): | |
| 26 | |
| 27 http://main.g2.bx.psu.edu/ | |
| 28 | |
| 29 2. ONTO-PERL (version >= 1.18): | |
| 30 | |
| 31 http://search.cpan.org/dist/ONTO-PERL/ | |
| 32 | |
| 33 COPYRIGHT AND LICENCE | |
| 34 ===================== | |
| 35 | |
| 36 Copyright (c) 2010 Erick Antezana. All rights reserved. | |
| 37 OONTO-Toolkit is free software; you can redistribute it and/or | |
| 38 modify it under the same terms as Perl itself. | |
| 39 | |
| 40 N.B. Galaxy is distributed as open source under the conditions of the | |
| 41 Academic Free License (http://www.opensource.org/licenses/academic.php). |