view onto-toolkit/README @ 0:4484575e4186

Migrated tool version 0.1 from old tool shed archive to new tool shed repository
author erick-antezana
date Tue, 07 Jun 2011 17:51:45 -0400
parents
children d2d26d330236
line wrap: on
line source

README
======

ONTO-Toolkit is a collection of Galaxy tools for managing ontologies 
that are represented in the OBO flat file format (spec 1.2). 

Those tools are basically wrappers around the most commonly used tasks 
provided by the ONTO-PERL suite.

See also:

  ONTO-PERL: An API supporting the development and analysis of bio-ontologies
  Antezana E, Egana M, De Baets B, Kuiper M, Mironov V.
  Bioinformatics 2008; doi: 10.1093/bioinformatics/btn042
  
For installing this collection of tools:

	see the file INSTALL

DEPENDENCIES
============

ONTO-Toolkit requires:

1. Galaxy (latest version is recommended):

	http://main.g2.bx.psu.edu/

2. ONTO-PERL (version >= 1.18):

	http://search.cpan.org/dist/ONTO-PERL/

COPYRIGHT AND LICENCE
=====================

Copyright (c) 2010 Erick Antezana. All rights reserved.
OONTO-Toolkit is free software; you can redistribute it and/or
modify it under the same terms as Perl itself.

N.B. Galaxy is distributed as open source under the conditions of the 
Academic Free License (http://www.opensource.org/licenses/academic.php).