Mercurial > repos > erick-antezana > onto-toolkit
annotate onto-toolkit/README @ 0:4484575e4186
Migrated tool version 0.1 from old tool shed archive to new tool shed repository
author | erick-antezana |
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date | Tue, 07 Jun 2011 17:51:45 -0400 |
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children | d2d26d330236 |
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1 README |
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2 ====== |
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3 |
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4 ONTO-Toolkit is a collection of Galaxy tools for managing ontologies |
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5 that are represented in the OBO flat file format (spec 1.2). |
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6 |
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7 Those tools are basically wrappers around the most commonly used tasks |
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8 provided by the ONTO-PERL suite. |
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9 |
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10 See also: |
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11 |
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12 ONTO-PERL: An API supporting the development and analysis of bio-ontologies |
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13 Antezana E, Egana M, De Baets B, Kuiper M, Mironov V. |
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14 Bioinformatics 2008; doi: 10.1093/bioinformatics/btn042 |
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15 |
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16 For installing this collection of tools: |
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17 |
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18 see the file INSTALL |
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19 |
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20 DEPENDENCIES |
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21 ============ |
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22 |
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23 ONTO-Toolkit requires: |
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24 |
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25 1. Galaxy (latest version is recommended): |
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26 |
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27 http://main.g2.bx.psu.edu/ |
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28 |
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29 2. ONTO-PERL (version >= 1.18): |
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30 |
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31 http://search.cpan.org/dist/ONTO-PERL/ |
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32 |
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33 COPYRIGHT AND LICENCE |
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34 ===================== |
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35 |
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36 Copyright (c) 2010 Erick Antezana. All rights reserved. |
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37 OONTO-Toolkit is free software; you can redistribute it and/or |
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38 modify it under the same terms as Perl itself. |
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39 |
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40 N.B. Galaxy is distributed as open source under the conditions of the |
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41 Academic Free License (http://www.opensource.org/licenses/academic.php). |