changeset 87:63c13d46bff8 draft

Uploaded 20171006
author fabio
date Fri, 06 Oct 2017 14:33:47 -0400
parents 169a250816b4
children 422189e4041e
files ._loadandplot.R ._plotwithscale.R ._testandplot.R loadandplot.xml test-data/._.DS_Store test-data/input/._Controls_regions.bed test-data/input/._Elements1_regions.bed test-data/input/._Elements2_regions.bed test-data/input/._Elements3_regions.bed test-data/input/._Feature1.bed test-data/input/._Feature2.bed test-data/input/._features.header.bed.txt test-data/input/._regions.header.txt test-data/output_loadandplot/._iwtomics.loadandplot.RData test-data/output_loadandplot/._iwtomics.loadandplot.features.txt test-data/output_loadandplot/._iwtomics.loadandplot.pdf test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf test-data/output_testandplot/._iwtomics.testandplot.RData test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf test-data/output_testandplot/._iwtomics.testandplot.tests.txt
diffstat 26 files changed, 2 insertions(+), 2 deletions(-) [+]
line wrap: on
line diff
Binary file ._loadandplot.R has changed
Binary file ._plotwithscale.R has changed
Binary file ._testandplot.R has changed
--- a/loadandplot.xml	Fri Oct 06 13:38:23 2017 -0400
+++ b/loadandplot.xml	Fri Oct 06 14:33:47 2017 -0400
@@ -16,7 +16,7 @@
       #set region_names = '|'.join( [ str( $r.name ) for $r in $regions ] )
       regionsfilenames='${region_names}'
       #if $regionsheader:
-        regionsheaderfile='${region_header}'
+        regionsheaderfile='${regionsheader}'
       #end if
       
       #set feature_paths = '|'.join( [ str( $f ) for $f in $features ] )
@@ -26,7 +26,7 @@
       #set feature_names = '|'.join( [ str( $f.name ) for $f in $features ] )
       featuresfilenames='${feature_names}'
       #if $featuresheader:
-        featuresheaderfile='${feature_header}'
+        featuresheaderfile='${featuresheader}'
       #end if
 
       smoothing="'${conditionaltype.smoothing}'"
Binary file test-data/._.DS_Store has changed
Binary file test-data/input/._Controls_regions.bed has changed
Binary file test-data/input/._Elements1_regions.bed has changed
Binary file test-data/input/._Elements2_regions.bed has changed
Binary file test-data/input/._Elements3_regions.bed has changed
Binary file test-data/input/._Feature1.bed has changed
Binary file test-data/input/._Feature2.bed has changed
Binary file test-data/input/._features.header.bed.txt has changed
Binary file test-data/input/._regions.header.txt has changed
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.RData has changed
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.features.txt has changed
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.pdf has changed
Binary file test-data/output_loadandplot/._iwtomics.loadandplot.regions.txt has changed
Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.adjustedpvalue.txt has changed
Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.iwtomicstestresults.pdf has changed
Binary file test-data/output_plotwithscale/._iwtomics.plotwithscale.summaryplot.pdf has changed
Binary file test-data/output_testandplot/._iwtomics.testandplot.RData has changed
Binary file test-data/output_testandplot/._iwtomics.testandplot.adjustedpvalue.matrix.txt has changed
Binary file test-data/output_testandplot/._iwtomics.testandplot.iwtomicstestresults.pdf has changed
Binary file test-data/output_testandplot/._iwtomics.testandplot.selectedfeatures.txt has changed
Binary file test-data/output_testandplot/._iwtomics.testandplot.summaryplot.pdf has changed
Binary file test-data/output_testandplot/._iwtomics.testandplot.tests.txt has changed