annotate test_data/out2.biom @ 0:7a7ecf9b9df7 draft

Initial upload
author fangly
date Mon, 29 Jul 2013 06:52:36 -0400
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2 "generated_by" : "Bio::Community version 0.1",
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3 "matrix_type" : "sparse",
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4 "date" : "2013-07-27T03:32:37",
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5 "data" : [
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51 ],
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52 "rows" : [
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53 {
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54 "metadata" : {
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55 "taxonomy" : [
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56 "k__Bacteria",
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57 "p__Cyanobacteria",
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58 "c__Nostocophycideae",
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59 "o__Nostocales",
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60 "f__Nostocaceae",
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61 "g__Dolichospermum",
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62 "s__"
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64 },
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65 "id" : "1"
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68 "metadata" : {
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69 "taxonomy" : [
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70 "k__Bacteria",
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71 "p__Firmicutes",
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72 "c__Clostridia",
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73 "o__Halanaerobiales",
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74 "f__Halanaerobiaceae",
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75 "g__Halanaerobium",
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76 "s__"
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77 ]
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78 },
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79 "id" : "3"
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83 "id" : "4"
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86 "metadata" : {
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87 "taxonomy" : [
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88 "k__Bacteria",
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89 "p__Proteobacteria",
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90 "c__Gammaproteobacteria",
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91 "o__Enterobacteriales",
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92 "f__Enterobacteriaceae",
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93 "g__Escherichia",
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100 "metadata" : {
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102 "k__Archaea",
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103 "p__Euryarchaeota",
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104 "c__Methanomicrobia",
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105 "o__Methanosarcinales",
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106 "f__Methanosarcinaceae",
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107 "g__Methanosarcina",
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108 "s__mazei"
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110 },
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111 "id" : "2"
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112 }
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113 ],
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114 "matrix_element_type" : "float",
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115 "format_url" : "http://biom-format.org/documentation/format_versions/biom-1.0.html",
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116 "format" : "Biological Observation Matrix 1.0",
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117 "columns" : [
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118 {
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119 "metadata" : null,
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120 "id" : "Sample1"
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121 },
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122 {
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123 "metadata" : null,
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124 "id" : "Sample2"
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125 },
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126 {
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127 "metadata" : null,
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128 "id" : "Sample3"
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129 }
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130 ],
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135 "id" : "",
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136 "type" : "OTU table"
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137 }