## Conf file for downloader_bank_hmdb.pl script
#
## Version
VERSION=1.1
##v1.0 : Init
##V1.1 : calculating and adding [M+H]+ and [M-H]- mono isotopic mass in banks
#
## ARGVT
PROTON_MASS=1.007825
ELECTRON_MASS=0.0005486
#CHARGE=1

#LOCAL BANKS VERSIONNING
LOCALBANK_PATH=banks

#HMDB archive url
HMDB_URL=
## Serum
SERUM_URL=http://www.hmdb.ca/system/downloads/current/serum_metabolites.zip
SERUM_FILE_NAME=serum_metabolites.xml
SERUM_HTTP_FORMAT=ZIP
SERUM_DB_FORMAT=XML
## Urine
URINE_URL=http://www.hmdb.ca/system/downloads/current/urine_metabolites.zip
URINE_FILE_NAME=urine_metabolites.xml
URINE_HTTP_FORMAT=ZIP
URINE_DB_FORMAT=XML
## Other matrices:
## CSF
CSF_URL=http://www.hmdb.ca/system/downloads/current/csf_metabolites.zip
CSF_FILE_NAME=csf_metabolites.xml
CSF_HTTP_FORMAT=ZIP
CSF_DB_FORMAT=XML
##FECES
FECES_URL=http://www.fecalmetabolome.ca/system/downloads/current/feces_metabolites.zip
FECES_FILE_NAME=feces_metabolites.xml
FECES_HTTP_FORMAT=ZIP
FECES_DB_FORMAT=XML
##SALIVA
SALIVA_URL=http://www.salivametabolome.ca/system/downloads/current/saliva_metabolites.zip
SALIVA_FILE_NAME=saliva_metabolites.xml
SALIVA_HTTP_FORMAT=ZIP
SALIVA_DB_FORMAT=XML
##RUMEN
RUMEN_URL=http://www.rumendb.ca/public/downloads/current/metabocards.gz
RUMEN_FILE_NAME=metabocards
RUMEN_HTTP_FORMAT=GZ
RUMEN_DB_FORMAT=CARD
##COW
COW_URL=http://www.cowmetdb.ca/public/downloads/current/metabocards.gz
COW_FILE_NAME=metabocards
COW_HTTP_FORMAT=GZ
COW_DB_FORMAT=CARD
##MILK
MILK_URL=http://www.mcdb.ca/system/downloads/current/milk_metabolites.zip
MILK_FILE_NAME=milk_metabolites.xml
MILK_HTTP_FORMAT=ZIP
MILK_DB_FORMAT=XML