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view seqtk_telo/seqtk_telo.xml @ 1:0183cad9d13b draft
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author | fubar |
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date | Thu, 22 Feb 2024 10:48:01 +0000 |
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<tool name="seqtk_telo" id="seqtk_telo" version="1.4" profile="22.05"> <!--Source in git at: https://github.com/fubar2/galaxy_tf_overlay--> <!--Created by toolfactory@galaxy.org at 09/12/2023 14:04:09 using the Galaxy Tool Factory.--> <description></description> <requirements> <requirement version="1.4" type="package">seqtk</requirement> </requirements> <version_command><![CDATA[echo "1.4"]]></version_command> <command><![CDATA[bash $runme]]></command> <configfiles> <configfile name="runme"><![CDATA[seqtk telo $infa > $out_bed ]]></configfile> </configfiles> <inputs> <param name="infa" type="data" optional="false" label="Fasta input for telomere finding" help="" format="fasta" multiple="false"/> </inputs> <outputs> <data name="out_bed" format="bed" label="seqtk_telo on $infa.element_identifier" hidden="false"/> </outputs> <tests> <test> <output name="out_bed" value="out_bed_sample" compare="diff" lines_diff="0"/> <param name="infa" value="infa_sample"/> </test> </tests> <help><![CDATA[ **What it Does** ]]></help> <citations> <citation type="doi">10.1093/bioinformatics/bts573</citation> </citations> </tool>