Mercurial > repos > fubar > microsatbed

diff seqrequester/build/obj/lib/libseqrequester.a/utility/src/align/align-ssw.P @ 1:1085e094cf5f draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/microsatbed commit 7ceb6658309a7ababe622b5d92e729e5470e22f0-dirty
author fubar
date Sat, 13 Jul 2024 12:39:06 +0000
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/seqrequester/build/obj/lib/libseqrequester.a/utility/src/align/align-ssw.P	Sat Jul 13 12:39:06 2024 +0000
@@ -0,0 +1,279 @@
+/home/ross/rossgit/microsatbed/seqrequester/build/obj/lib/libseqrequester.a/utility/src/align/align-ssw.o: \
+ utility/src/align/align-ssw.C /usr/include/stdc-predef.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/emmintrin.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/xmmintrin.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/mmintrin.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/mm_malloc.h \
+ /usr/include/c++/13/stdlib.h /usr/include/c++/13/cstdlib \
+ /usr/include/x86_64-linux-gnu/c++/13/bits/c++config.h \
+ /usr/include/x86_64-linux-gnu/c++/13/bits/os_defines.h \
+ /usr/include/features.h /usr/include/features-time64.h \
+ /usr/include/x86_64-linux-gnu/bits/wordsize.h \
+ /usr/include/x86_64-linux-gnu/bits/timesize.h \
+ /usr/include/x86_64-linux-gnu/sys/cdefs.h \
+ /usr/include/x86_64-linux-gnu/bits/long-double.h \
+ /usr/include/x86_64-linux-gnu/gnu/stubs.h \
+ /usr/include/x86_64-linux-gnu/gnu/stubs-64.h \
+ /usr/include/x86_64-linux-gnu/c++/13/bits/cpu_defines.h \
+ /usr/include/c++/13/pstl/pstl_config.h /usr/include/stdlib.h \
+ /usr/include/x86_64-linux-gnu/bits/libc-header-start.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/stddef.h \
+ /usr/include/x86_64-linux-gnu/bits/waitflags.h \
+ /usr/include/x86_64-linux-gnu/bits/waitstatus.h \
+ /usr/include/x86_64-linux-gnu/bits/floatn.h \
+ /usr/include/x86_64-linux-gnu/bits/floatn-common.h \
+ /usr/include/x86_64-linux-gnu/bits/types/locale_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/__locale_t.h \
+ /usr/include/x86_64-linux-gnu/sys/types.h \
+ /usr/include/x86_64-linux-gnu/bits/types.h \
+ /usr/include/x86_64-linux-gnu/bits/typesizes.h \
+ /usr/include/x86_64-linux-gnu/bits/time64.h \
+ /usr/include/x86_64-linux-gnu/bits/types/clock_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/clockid_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/time_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/timer_t.h \
+ /usr/include/x86_64-linux-gnu/bits/stdint-intn.h /usr/include/endian.h \
+ /usr/include/x86_64-linux-gnu/bits/endian.h \
+ /usr/include/x86_64-linux-gnu/bits/endianness.h \
+ /usr/include/x86_64-linux-gnu/bits/byteswap.h \
+ /usr/include/x86_64-linux-gnu/bits/uintn-identity.h \
+ /usr/include/x86_64-linux-gnu/sys/select.h \
+ /usr/include/x86_64-linux-gnu/bits/select.h \
+ /usr/include/x86_64-linux-gnu/bits/types/sigset_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/__sigset_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/struct_timeval.h \
+ /usr/include/x86_64-linux-gnu/bits/types/struct_timespec.h \
+ /usr/include/x86_64-linux-gnu/bits/select2.h \
+ /usr/include/x86_64-linux-gnu/bits/select-decl.h \
+ /usr/include/x86_64-linux-gnu/bits/pthreadtypes.h \
+ /usr/include/x86_64-linux-gnu/bits/thread-shared-types.h \
+ /usr/include/x86_64-linux-gnu/bits/pthreadtypes-arch.h \
+ /usr/include/x86_64-linux-gnu/bits/atomic_wide_counter.h \
+ /usr/include/x86_64-linux-gnu/bits/struct_mutex.h \
+ /usr/include/x86_64-linux-gnu/bits/struct_rwlock.h /usr/include/alloca.h \
+ /usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h \
+ /usr/include/x86_64-linux-gnu/bits/stdlib-float.h \
+ /usr/include/x86_64-linux-gnu/bits/stdlib.h \
+ /usr/include/c++/13/bits/std_abs.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/stdint.h /usr/include/stdint.h \
+ /usr/include/x86_64-linux-gnu/bits/wchar.h \
+ /usr/include/x86_64-linux-gnu/bits/stdint-uintn.h \
+ /usr/include/x86_64-linux-gnu/bits/stdint-least.h /usr/include/stdio.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/stdarg.h \
+ /usr/include/x86_64-linux-gnu/bits/types/__fpos_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/__mbstate_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/__fpos64_t.h \
+ /usr/include/x86_64-linux-gnu/bits/types/__FILE.h \
+ /usr/include/x86_64-linux-gnu/bits/types/FILE.h \
+ /usr/include/x86_64-linux-gnu/bits/types/struct_FILE.h \
+ /usr/include/x86_64-linux-gnu/bits/types/cookie_io_functions_t.h \
+ /usr/include/x86_64-linux-gnu/bits/stdio_lim.h \
+ /usr/include/x86_64-linux-gnu/bits/stdio2-decl.h \
+ /usr/include/x86_64-linux-gnu/bits/stdio.h \
+ /usr/include/x86_64-linux-gnu/bits/stdio2.h /usr/include/string.h \
+ /usr/include/strings.h \
+ /usr/include/x86_64-linux-gnu/bits/strings_fortified.h \
+ /usr/include/x86_64-linux-gnu/bits/string_fortified.h \
+ /usr/include/c++/13/math.h /usr/include/c++/13/cmath \
+ /usr/include/c++/13/bits/requires_hosted.h \
+ /usr/include/c++/13/bits/cpp_type_traits.h \
+ /usr/include/c++/13/ext/type_traits.h /usr/include/math.h \
+ /usr/include/x86_64-linux-gnu/bits/math-vector.h \
+ /usr/include/x86_64-linux-gnu/bits/libm-simd-decl-stubs.h \
+ /usr/include/x86_64-linux-gnu/bits/flt-eval-method.h \
+ /usr/include/x86_64-linux-gnu/bits/fp-logb.h \
+ /usr/include/x86_64-linux-gnu/bits/fp-fast.h \
+ /usr/include/x86_64-linux-gnu/bits/mathcalls-helper-functions.h \
+ /usr/include/x86_64-linux-gnu/bits/mathcalls.h \
+ /usr/include/x86_64-linux-gnu/bits/mathcalls-narrow.h \
+ /usr/include/x86_64-linux-gnu/bits/iscanonical.h \
+ /usr/include/c++/13/bits/specfun.h \
+ /usr/include/c++/13/bits/stl_algobase.h \
+ /usr/include/c++/13/bits/functexcept.h \
+ /usr/include/c++/13/bits/exception_defines.h \
+ /usr/include/c++/13/ext/numeric_traits.h \
+ /usr/include/c++/13/bits/stl_pair.h /usr/include/c++/13/type_traits \
+ /usr/include/c++/13/bits/move.h /usr/include/c++/13/bits/utility.h \
+ /usr/include/c++/13/compare /usr/include/c++/13/concepts \
+ /usr/include/c++/13/bits/stl_iterator_base_types.h \
+ /usr/include/c++/13/bits/iterator_concepts.h \
+ /usr/include/c++/13/bits/ptr_traits.h \
+ /usr/include/c++/13/bits/ranges_cmp.h \
+ /usr/include/c++/13/bits/stl_iterator_base_funcs.h \
+ /usr/include/c++/13/bits/concept_check.h \
+ /usr/include/c++/13/debug/assertions.h \
+ /usr/include/c++/13/bits/stl_iterator.h /usr/include/c++/13/new \
+ /usr/include/c++/13/bits/exception.h \
+ /usr/include/c++/13/bits/stl_construct.h \
+ /usr/include/c++/13/debug/debug.h \
+ /usr/include/c++/13/bits/predefined_ops.h /usr/include/c++/13/bit \
+ /usr/include/c++/13/limits /usr/include/c++/13/tr1/gamma.tcc \
+ /usr/include/c++/13/tr1/special_function_util.h \
+ /usr/include/c++/13/tr1/bessel_function.tcc \
+ /usr/include/c++/13/tr1/beta_function.tcc \
+ /usr/include/c++/13/tr1/ell_integral.tcc \
+ /usr/include/c++/13/tr1/exp_integral.tcc \
+ /usr/include/c++/13/tr1/hypergeometric.tcc \
+ /usr/include/c++/13/tr1/legendre_function.tcc \
+ /usr/include/c++/13/tr1/modified_bessel_func.tcc \
+ /usr/include/c++/13/tr1/poly_hermite.tcc \
+ /usr/include/c++/13/tr1/poly_laguerre.tcc \
+ /usr/include/c++/13/tr1/riemann_zeta.tcc utility/src/align/align-ssw.H \
+ /usr/include/c++/13/cstdio /usr/include/c++/13/cstdint \
+ /usr/include/c++/13/cstring utility/src/htslib/hts/sam.h \
+ /usr/include/errno.h /usr/include/x86_64-linux-gnu/bits/errno.h \
+ /usr/include/linux/errno.h /usr/include/x86_64-linux-gnu/asm/errno.h \
+ /usr/include/asm-generic/errno.h /usr/include/asm-generic/errno-base.h \
+ /usr/include/x86_64-linux-gnu/bits/types/error_t.h \
+ utility/src/htslib/hts/hts.h /usr/include/inttypes.h \
+ utility/src/htslib/hts/hts_defs.h utility/src/htslib/hts/hts_log.h \
+ utility/src/htslib/hts/kstring.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/limits.h \
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/syslimits.h \
+ /usr/include/limits.h /usr/include/x86_64-linux-gnu/bits/posix1_lim.h \
+ /usr/include/x86_64-linux-gnu/bits/local_lim.h \
+ /usr/include/linux/limits.h \
+ /usr/include/x86_64-linux-gnu/bits/pthread_stack_min-dynamic.h \
+ /usr/include/x86_64-linux-gnu/bits/posix2_lim.h \
+ /usr/include/x86_64-linux-gnu/bits/xopen_lim.h \
+ /usr/include/x86_64-linux-gnu/bits/uio_lim.h \
+ utility/src/htslib/hts/kroundup.h utility/src/htslib/hts/hts_endian.h
+ utility/src/align/align-ssw.C /usr/include/stdc-predef.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/emmintrin.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/xmmintrin.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/mmintrin.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/mm_malloc.h :
+ /usr/include/c++/13/stdlib.h /usr/include/c++/13/cstdlib :
+ /usr/include/x86_64-linux-gnu/c++/13/bits/c++config.h :
+ /usr/include/x86_64-linux-gnu/c++/13/bits/os_defines.h :
+ /usr/include/features.h /usr/include/features-time64.h :
+ /usr/include/x86_64-linux-gnu/bits/wordsize.h :
+ /usr/include/x86_64-linux-gnu/bits/timesize.h :
+ /usr/include/x86_64-linux-gnu/sys/cdefs.h :
+ /usr/include/x86_64-linux-gnu/bits/long-double.h :
+ /usr/include/x86_64-linux-gnu/gnu/stubs.h :
+ /usr/include/x86_64-linux-gnu/gnu/stubs-64.h :
+ /usr/include/x86_64-linux-gnu/c++/13/bits/cpu_defines.h :
+ /usr/include/c++/13/pstl/pstl_config.h /usr/include/stdlib.h :
+ /usr/include/x86_64-linux-gnu/bits/libc-header-start.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/stddef.h :
+ /usr/include/x86_64-linux-gnu/bits/waitflags.h :
+ /usr/include/x86_64-linux-gnu/bits/waitstatus.h :
+ /usr/include/x86_64-linux-gnu/bits/floatn.h :
+ /usr/include/x86_64-linux-gnu/bits/floatn-common.h :
+ /usr/include/x86_64-linux-gnu/bits/types/locale_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/__locale_t.h :
+ /usr/include/x86_64-linux-gnu/sys/types.h :
+ /usr/include/x86_64-linux-gnu/bits/types.h :
+ /usr/include/x86_64-linux-gnu/bits/typesizes.h :
+ /usr/include/x86_64-linux-gnu/bits/time64.h :
+ /usr/include/x86_64-linux-gnu/bits/types/clock_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/clockid_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/time_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/timer_t.h :
+ /usr/include/x86_64-linux-gnu/bits/stdint-intn.h /usr/include/endian.h :
+ /usr/include/x86_64-linux-gnu/bits/endian.h :
+ /usr/include/x86_64-linux-gnu/bits/endianness.h :
+ /usr/include/x86_64-linux-gnu/bits/byteswap.h :
+ /usr/include/x86_64-linux-gnu/bits/uintn-identity.h :
+ /usr/include/x86_64-linux-gnu/sys/select.h :
+ /usr/include/x86_64-linux-gnu/bits/select.h :
+ /usr/include/x86_64-linux-gnu/bits/types/sigset_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/__sigset_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/struct_timeval.h :
+ /usr/include/x86_64-linux-gnu/bits/types/struct_timespec.h :
+ /usr/include/x86_64-linux-gnu/bits/select2.h :
+ /usr/include/x86_64-linux-gnu/bits/select-decl.h :
+ /usr/include/x86_64-linux-gnu/bits/pthreadtypes.h :
+ /usr/include/x86_64-linux-gnu/bits/thread-shared-types.h :
+ /usr/include/x86_64-linux-gnu/bits/pthreadtypes-arch.h :
+ /usr/include/x86_64-linux-gnu/bits/atomic_wide_counter.h :
+ /usr/include/x86_64-linux-gnu/bits/struct_mutex.h :
+ /usr/include/x86_64-linux-gnu/bits/struct_rwlock.h /usr/include/alloca.h :
+ /usr/include/x86_64-linux-gnu/bits/stdlib-bsearch.h :
+ /usr/include/x86_64-linux-gnu/bits/stdlib-float.h :
+ /usr/include/x86_64-linux-gnu/bits/stdlib.h :
+ /usr/include/c++/13/bits/std_abs.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/stdint.h /usr/include/stdint.h :
+ /usr/include/x86_64-linux-gnu/bits/wchar.h :
+ /usr/include/x86_64-linux-gnu/bits/stdint-uintn.h :
+ /usr/include/x86_64-linux-gnu/bits/stdint-least.h /usr/include/stdio.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/stdarg.h :
+ /usr/include/x86_64-linux-gnu/bits/types/__fpos_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/__mbstate_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/__fpos64_t.h :
+ /usr/include/x86_64-linux-gnu/bits/types/__FILE.h :
+ /usr/include/x86_64-linux-gnu/bits/types/FILE.h :
+ /usr/include/x86_64-linux-gnu/bits/types/struct_FILE.h :
+ /usr/include/x86_64-linux-gnu/bits/types/cookie_io_functions_t.h :
+ /usr/include/x86_64-linux-gnu/bits/stdio_lim.h :
+ /usr/include/x86_64-linux-gnu/bits/stdio2-decl.h :
+ /usr/include/x86_64-linux-gnu/bits/stdio.h :
+ /usr/include/x86_64-linux-gnu/bits/stdio2.h /usr/include/string.h :
+ /usr/include/strings.h :
+ /usr/include/x86_64-linux-gnu/bits/strings_fortified.h :
+ /usr/include/x86_64-linux-gnu/bits/string_fortified.h :
+ /usr/include/c++/13/math.h /usr/include/c++/13/cmath :
+ /usr/include/c++/13/bits/requires_hosted.h :
+ /usr/include/c++/13/bits/cpp_type_traits.h :
+ /usr/include/c++/13/ext/type_traits.h /usr/include/math.h :
+ /usr/include/x86_64-linux-gnu/bits/math-vector.h :
+ /usr/include/x86_64-linux-gnu/bits/libm-simd-decl-stubs.h :
+ /usr/include/x86_64-linux-gnu/bits/flt-eval-method.h :
+ /usr/include/x86_64-linux-gnu/bits/fp-logb.h :
+ /usr/include/x86_64-linux-gnu/bits/fp-fast.h :
+ /usr/include/x86_64-linux-gnu/bits/mathcalls-helper-functions.h :
+ /usr/include/x86_64-linux-gnu/bits/mathcalls.h :
+ /usr/include/x86_64-linux-gnu/bits/mathcalls-narrow.h :
+ /usr/include/x86_64-linux-gnu/bits/iscanonical.h :
+ /usr/include/c++/13/bits/specfun.h :
+ /usr/include/c++/13/bits/stl_algobase.h :
+ /usr/include/c++/13/bits/functexcept.h :
+ /usr/include/c++/13/bits/exception_defines.h :
+ /usr/include/c++/13/ext/numeric_traits.h :
+ /usr/include/c++/13/bits/stl_pair.h /usr/include/c++/13/type_traits :
+ /usr/include/c++/13/bits/move.h /usr/include/c++/13/bits/utility.h :
+ /usr/include/c++/13/compare /usr/include/c++/13/concepts :
+ /usr/include/c++/13/bits/stl_iterator_base_types.h :
+ /usr/include/c++/13/bits/iterator_concepts.h :
+ /usr/include/c++/13/bits/ptr_traits.h :
+ /usr/include/c++/13/bits/ranges_cmp.h :
+ /usr/include/c++/13/bits/stl_iterator_base_funcs.h :
+ /usr/include/c++/13/bits/concept_check.h :
+ /usr/include/c++/13/debug/assertions.h :
+ /usr/include/c++/13/bits/stl_iterator.h /usr/include/c++/13/new :
+ /usr/include/c++/13/bits/exception.h :
+ /usr/include/c++/13/bits/stl_construct.h :
+ /usr/include/c++/13/debug/debug.h :
+ /usr/include/c++/13/bits/predefined_ops.h /usr/include/c++/13/bit :
+ /usr/include/c++/13/limits /usr/include/c++/13/tr1/gamma.tcc :
+ /usr/include/c++/13/tr1/special_function_util.h :
+ /usr/include/c++/13/tr1/bessel_function.tcc :
+ /usr/include/c++/13/tr1/beta_function.tcc :
+ /usr/include/c++/13/tr1/ell_integral.tcc :
+ /usr/include/c++/13/tr1/exp_integral.tcc :
+ /usr/include/c++/13/tr1/hypergeometric.tcc :
+ /usr/include/c++/13/tr1/legendre_function.tcc :
+ /usr/include/c++/13/tr1/modified_bessel_func.tcc :
+ /usr/include/c++/13/tr1/poly_hermite.tcc :
+ /usr/include/c++/13/tr1/poly_laguerre.tcc :
+ /usr/include/c++/13/tr1/riemann_zeta.tcc utility/src/align/align-ssw.H :
+ /usr/include/c++/13/cstdio /usr/include/c++/13/cstdint :
+ /usr/include/c++/13/cstring utility/src/htslib/hts/sam.h :
+ /usr/include/errno.h /usr/include/x86_64-linux-gnu/bits/errno.h :
+ /usr/include/linux/errno.h /usr/include/x86_64-linux-gnu/asm/errno.h :
+ /usr/include/asm-generic/errno.h /usr/include/asm-generic/errno-base.h :
+ /usr/include/x86_64-linux-gnu/bits/types/error_t.h :
+ utility/src/htslib/hts/hts.h /usr/include/inttypes.h :
+ utility/src/htslib/hts/hts_defs.h utility/src/htslib/hts/hts_log.h :
+ utility/src/htslib/hts/kstring.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/limits.h :
+ /usr/lib/gcc/x86_64-linux-gnu/13/include/syslimits.h :
+ /usr/include/limits.h /usr/include/x86_64-linux-gnu/bits/posix1_lim.h :
+ /usr/include/x86_64-linux-gnu/bits/local_lim.h :
+ /usr/include/linux/limits.h :
+ /usr/include/x86_64-linux-gnu/bits/pthread_stack_min-dynamic.h :
+ /usr/include/x86_64-linux-gnu/bits/posix2_lim.h :
+ /usr/include/x86_64-linux-gnu/bits/xopen_lim.h :
+ /usr/include/x86_64-linux-gnu/bits/uio_lim.h :
+ utility/src/htslib/hts/kroundup.h utility/src/htslib/hts/hts_endian.h :