<tool name="pyrevpos" id="pyrevpos" version="0.01">
  <!--Source in git at: https://github.com/fubar2/toolfactory-->
  <!--Created by test@bx.psu.edu at 11/05/2021 18:27:13 using the Galaxy Tool Factory.-->
  <description>positional reverse</description>
  <requirements>
    <requirement type="package">python</requirement>
  </requirements>
  <stdio>
    <exit_code range="1:" level="fatal"/>
  </stdio>
  <version_command><![CDATA[echo "0.01"]]></version_command>
  <command><![CDATA[python
$runme
$input
$output2]]></command>
  <configfiles>
    <configfile name="runme"><![CDATA[#raw

import sys; inp = sys.argv[1]; outp = sys.argv[2]; inlist = open(inp,'r').readlines(); o = open(outp,'w'); rs = [''.join(list(reversed(x.rstrip()))) for x in inlist]; o.write('\n'.join(rs)); o.close()

#end raw]]></configfile>
  </configfiles>
  <inputs>
    <param name="input" type="data" optional="false" label="input" help="help" format="txt" multiple="false"/>
  </inputs>
  <outputs>
    <data name="output2" format="txt" label="output2" hidden="false"/>
  </outputs>
  <tests>
    <test>
      <output name="output2" value="output2_sample" compare="diff" lines_diff="0"/>
      <param name="input" value="input_sample"/>
    </test>
  </tests>
  <help><![CDATA[

help text goes here

 

------


Script::

    import sys; inp = sys.argv[1]; outp = sys.argv[2]; inlist = open(inp,'r').readlines(); o = open(outp,'w'); rs = [''.join(list(reversed(x.rstrip()))) for x in inlist]; o.write('\n'.join(rs)); o.close()

]]></help>
  <citations>
    <citation type="doi">10.1093/bioinformatics/bts573</citation>
  </citations>
</tool>