Mercurial > repos > gga > chado_expression_delete_all_biomaterials

annotate expression_delete_all_biomaterials.xml @ 10:391dc72689db draft

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"planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 7bf18c69becc57152efdadedf7ebd0bcfa382a15"
author gga
date Mon, 29 Jun 2020 09:26:45 -0400
parents 24b13e012f3e
children
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db7db54dd2d8 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 3c4fb887c809face4fbe4602617d6dc094b15864
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1 <?xml version="1.0"?>
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24b13e012f3e "planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 1640878827bdc3870b6f34eded3a3f7571a1849f"
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2 <tool id="expression_delete_all_biomaterials" name="Chado biomaterials delete all" version="@WRAPPER_VERSION@">
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3 <description></description>
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4 <macros>
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5 <import>macros.xml</import>
d971894a31a3 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit f5c5d81fc9781371e12b91c0d609b9201587cda5
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6 </macros>
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7 <expand macro="requirements"/>
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8 <command detect_errors="aggressive"><![CDATA[
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9 @START_PSQL@ &&
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db7db54dd2d8 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 3c4fb887c809face4fbe4602617d6dc094b15864
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11 chakin expression delete_all_biomaterials
db7db54dd2d8 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 3c4fb887c809face4fbe4602617d6dc094b15864
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db7db54dd2d8 planemo upload for repository https://github.com/galaxy-genome-annotation/galaxy-tools/tree/master/tools/chado commit 3c4fb887c809face4fbe4602617d6dc094b15864
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13 $confirm
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15 > '$results'
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17 @ZIP_PSQL@
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18 ]]></command>
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19 <inputs>
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20 <expand macro="psql_target"/>
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21 <!-- options -->
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22 <param name="confirm" label="Confirm" argument="confirm" type="boolean" truevalue="--confirm" falsevalue="" help="Confirm that you really do want to delete ALL of the biomaterials." />
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23
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24 <expand macro="wait_for"/>
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25 </inputs>
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26 <outputs>
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27 <data format="txt" name="results"/>
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28 <data format="postgresql" name="outfile" from_work_dir="postgresql_out.tar.bz2" label="${tool.name} on ${on_string}">
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29 <filter>psql_target['method'] == "pgtools"</filter>
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30 </data>
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31 </outputs>
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32 <help>
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33 Delete all biomaterials
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35 @HELP@
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36 </help>
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37 </tool>