Mercurial > repos > guerler > ffindex_dbkit_merge
view dbkit_merge.xml @ 3:37b77aabeb3e draft default tip
"planemo upload commit fe7295ad48151648562b06d5b075a68d77747326"
author | guerler |
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date | Thu, 08 Apr 2021 18:19:29 +0000 |
parents | 34214e1c16e8 |
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<tool id="ffindex_dbkit_merge" name="DBKit Merge" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" license="MIT" profile="20.01"> <description>two databases</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements" /> <command detect_errors="exit_code"><![CDATA[ dbkit_merge.py @db_source@ @db_source2@ -oi '$outindex' -od '$outdata' -log '$logfile' ]]> </command> <inputs> <expand macro="db_source" /> <expand macro="db_source2" /> <expand macro="logfile" /> </inputs> <outputs> <data name="outindex" format="ffindex" label="DBKit Merged Index" /> <data name="outdata" format="ffdata" label="DBKit Merged Database" /> <data format="txt" name="logfile" label="DBKit Merged Log"> <filter>logfile</filter> </data> </outputs> <tests> <test> <conditional name="db_source"> <param name="db_source_selector" value="history" /> <param name="ffindex" value="create/first.ffindex" /> <param name="ffdata" value="create/first.ffdata" /> </conditional> <conditional name="db_source2"> <param name="db_source_selector" value="history" /> <param name="ffindex" value="merge/second.ffindex" /> <param name="ffdata" value="merge/second.ffdata" /> </conditional> <output name="outindex" file="merge/result.ffindex" /> <output name="outdata" file="merge/result.ffdata" /> </test> <test> <conditional name="db_source"> <param name="db_source_selector" value="indexed" /> <param name="ffindex" value="first" /> </conditional> <conditional name="db_source2"> <param name="db_source_selector" value="indexed" /> <param name="ffindex" value="second" /> </conditional> <output name="outindex" file="merge/result.ffindex" /> <output name="outdata" file="merge/result.ffdata" /> </test> </tests> <help><![CDATA[ **What it does** This database creation tool merges two pairs of ffindex/ffdata entries into a single ffindex/ffdata pair. ]]> </help> <expand macro="citations" /> </tool>