Mercurial > repos > hepcat72 > extractsplitreads_bwamem
diff extractSplitReads_BwaMem.xml @ 1:a20ac5d90c16 draft default tip
planemo upload commit 0066847e0ac19632c3091ac3148069de3bb3855f-dirty
author | hepcat72 |
---|---|
date | Fri, 10 Aug 2018 13:15:57 -0400 |
parents | 839c219ab0aa |
children |
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--- a/extractSplitReads_BwaMem.xml Fri Aug 10 11:46:23 2018 -0400 +++ b/extractSplitReads_BwaMem.xml Fri Aug 10 13:15:57 2018 -0400 @@ -1,4 +1,4 @@ -<tool id="extractsplitreads_bwamem" +<tool id="extractSplitReads_BwaMem" name="Extract Split Reads" version="0.1.0"> @@ -8,8 +8,6 @@ <requirement type="package" version="0.2.14a">lumpy-sv</requirement> </requirements> - <!-- Not sure yet how to call the command if the lumpy-sv package in bioconda doesn't put the script in an executable location on PATH --> - <version_command>extractSplitReads_BwaMem | grep ^extractSplitReads_BwaMem | cut -d v -f 2</version_command> <command detect_errors="aggressive">