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1 <tool id="cshl_fastx_nucleotides_distribution_line_plot" name="Draw nucleotides distribution line chart">
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2 <command>
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3 fastx_nucleotide_distribution_line_graph.sh -i '$input' -o '$output'
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4 </command>
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5
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6 <inputs>
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7 <param format="txt" name="input" type="data" label="Statistics Text File (output of 'FASTX Statistics' tool)" />
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8 </inputs>
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9
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10 <outputs>
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11 <data format="png" name="output" metadata_source="input"
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12 />
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13 </outputs>
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14 <help>
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15
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16 **What it does**
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17
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18 Creates a line and points graph for the nucleotide distribution in the Solexa library.
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19
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20 .. class:: infomark
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21
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22 **TIP:** Use the **FASTQ Statistics** tool to generate the report file needed for this tool.
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23
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24 -----
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25
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26 **Output Examples**
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27
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28 .. image:: ../static/fastx_icons/fastq_nucleotides_distribution_line_graph.png
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29
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30 ------
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31
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32 This tool was created by Oliver Tam, based on `FASTX-toolkit`__ by Assaf Gordon.
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33
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34 .. __: http://hannonlab.cshl.edu/fastx_toolkit/
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35
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36 </help>
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37 </tool>
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38 <!-- FASTQ-Nucleotides-Distribution-Line is part of the FASTX-toolkit, by A.Gordon (gordon@cshl.edu) -->
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