Mercurial > repos > ieguinoa > data_manager_salmon_index_builder
view data_manager_conf.xml @ 5:3888ec1918d0 draft
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author | ieguinoa |
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date | Thu, 03 Jan 2019 10:51:18 -0500 |
parents | c5dea2080109 |
children | d22f69a2e80e |
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<?xml version="1.0"?> <data_managers> <data_manager tool_file="data_manager/salmon_index_builder.xml" id="salmon_index_builder" version="0.1"> <data_table name="salmon_indexes"> <output> <column name="value" /> <column name="dbkey" /> <column name="name" /> <column name="path" output_ref="out_file" > <move type="directory" relativize_symlinks="True"> <!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base --> <target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/salmon_index/${path}</target> </move> <value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${dbkey}/salmon_index/${path}</value_translation> <value_translation type="function">abspath</value_translation> </column> </output> </data_table> </data_manager> </data_managers>