Mercurial > repos > iracooke > protk_trans_proteomic_pipeline
diff tool_dependencies.xml @ 3:e85a18371516 default tip
Update
author | Ira Cooke <iracooke@gmail.com> |
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date | Sun, 09 Jun 2013 08:17:06 -0500 |
parents | cedd5e884349 |
children |
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--- a/tool_dependencies.xml Tue Mar 05 00:14:39 2013 -0500 +++ b/tool_dependencies.xml Sun Jun 09 08:17:06 2013 -0500 @@ -1,10 +1,13 @@ <?xml version="1.0"?> <tool_dependency> + <package name="galaxy_protk" version="1.2.2"> + <repository toolshed="http://toolshed.g2.bx.psu.edu" name="galaxy_protk" owner="iracooke" changeset_revision="c25df71f7b68" prior_installation_required="True"/> + </package> <package name="trans_proteomic_pipeline" version="4.6.1"> <install version="1.0"> <actions> <action type="download_by_url">https://dl.dropbox.com/u/226794/galaxy_protk.tar.gz</action> - <action type="shell_command">sh install_tpp.sh $INSTALL_DIR 1.2.0</action> + <action type="shell_command">sh install_tpp.sh $INSTALL_DIR 1.2.2</action> <action type="move_file"> <source>install_tpp.sh</source> <destination>$INSTALL_DIR</destination> @@ -16,12 +19,10 @@ </actions> </install> <readme> - Compiling the TPP requires g++ subversion libbz2-dev swig expat libpng12-dev gnuplot libperl-dev libgd2-dev libgd2-xpm-dev libfuse-dev libcurl4-openssl-dev - The Trans Proteomic Pipeline is a collection of proteomics tools. For more information see http://tools.proteomecenter.org/wiki/index.php?title=Software:TPP This package installs the TPP (Trans Proteomic Pipeline) using an installation script contained in protk. It requires the galaxy_protk package to be installed before it will work. </readme> </package> -</tool_dependency> \ No newline at end of file +</tool_dependency>