Mercurial > repos > iuc > aldex2
comparison macros.xml @ 0:f4d0bd4b4d6d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/aldex2 commit b99f09cf03f075a6881d192b0f1233233289fa60
| author | iuc |
|---|---|
| date | Wed, 29 Jun 2022 07:36:45 +0000 |
| parents | |
| children |
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| -1:000000000000 | 0:f4d0bd4b4d6d |
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| 1 <macros> | |
| 2 <token name="@TOOL_VERSION@">1.26.0</token> | |
| 3 <token name="@VERSION_SUFFIX@">0</token> | |
| 4 <token name="@PROFILE@">21.01</token> | |
| 5 <xml name="biotools"> | |
| 6 <xrefs> | |
| 7 <xref type="bio.tools">aldex2</xref> | |
| 8 </xrefs> | |
| 9 </xml> | |
| 10 <xml name="requirements"> | |
| 11 <requirements> | |
| 12 <requirement type="package" version="@TOOL_VERSION@">bioconductor-aldex2</requirement> | |
| 13 <requirement type="package" version="1.14.2">r-data.table</requirement> | |
| 14 <requirement type="package" version="1.7.1">r-optparse</requirement> | |
| 15 <requirement type="package" version="1.9.2">r-qgraph</requirement> | |
| 16 </requirements> | |
| 17 </xml> | |
| 18 <xml name="aldex_test_param"> | |
| 19 <param name="aldex_test" type="select" label="Select the tests to be performed"> | |
| 20 <option value="t" selected="true">Welch's t and Wilcoxon tests</option> | |
| 21 <option value="kw">Kruskal-Wallace and glm tests</option> | |
| 22 <option value="corr">Correlation test</option> | |
| 23 </param> | |
| 24 </xml> | |
| 25 <xml name="effect_param"> | |
| 26 <param argument="--effect" type="boolean" truevalue="true" falsevalue="false" checked="true" label="Calculate abundances and effect sizes?" help="Used only for Welch's t and Wilcoxon tests or if performing tests iteratively"/> | |
| 27 </xml> | |
| 28 <xml name="include_sample_summary_param"> | |
| 29 <param argument="--include_sample_summary" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Include median clr values for each sample?"/> | |
| 30 </xml> | |
| 31 <xml name="iterate_param"> | |
| 32 <param argument="--iterate" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Perform tests iteratively?"/> | |
| 33 </xml> | |
| 34 <xml name="sanitize_query" token_validinitial="string.printable"> | |
| 35 <sanitizer> | |
| 36 <valid initial="@VALIDINITIAL@"> | |
| 37 <remove value="'"/> | |
| 38 </valid> | |
| 39 <mapping initial="none"> | |
| 40 <add source="'" target="'"'"'"/> | |
| 41 </mapping> | |
| 42 </sanitizer> | |
| 43 </xml> | |
| 44 <xml name="citations"> | |
| 45 <citations> | |
| 46 <citation type="doi">10.1371/journal.pone.0067019</citation> | |
| 47 <citation type="doi">10.1186/2049-2618-2-15</citation> | |
| 48 <citation type="doi">10.1080/10618600.2015.1131161</citation> | |
| 49 </citations> | |
| 50 </xml> | |
| 51 </macros> | |
| 52 |