Mercurial > repos > iuc > aldex2
diff macros.xml @ 0:f4d0bd4b4d6d draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/aldex2 commit b99f09cf03f075a6881d192b0f1233233289fa60
| author | iuc |
|---|---|
| date | Wed, 29 Jun 2022 07:36:45 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/macros.xml Wed Jun 29 07:36:45 2022 +0000 @@ -0,0 +1,52 @@ +<macros> + <token name="@TOOL_VERSION@">1.26.0</token> + <token name="@VERSION_SUFFIX@">0</token> + <token name="@PROFILE@">21.01</token> + <xml name="biotools"> + <xrefs> + <xref type="bio.tools">aldex2</xref> + </xrefs> + </xml> + <xml name="requirements"> + <requirements> + <requirement type="package" version="@TOOL_VERSION@">bioconductor-aldex2</requirement> + <requirement type="package" version="1.14.2">r-data.table</requirement> + <requirement type="package" version="1.7.1">r-optparse</requirement> + <requirement type="package" version="1.9.2">r-qgraph</requirement> + </requirements> + </xml> + <xml name="aldex_test_param"> + <param name="aldex_test" type="select" label="Select the tests to be performed"> + <option value="t" selected="true">Welch's t and Wilcoxon tests</option> + <option value="kw">Kruskal-Wallace and glm tests</option> + <option value="corr">Correlation test</option> + </param> + </xml> + <xml name="effect_param"> + <param argument="--effect" type="boolean" truevalue="true" falsevalue="false" checked="true" label="Calculate abundances and effect sizes?" help="Used only for Welch's t and Wilcoxon tests or if performing tests iteratively"/> + </xml> + <xml name="include_sample_summary_param"> + <param argument="--include_sample_summary" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Include median clr values for each sample?"/> + </xml> + <xml name="iterate_param"> + <param argument="--iterate" type="boolean" truevalue="true" falsevalue="false" checked="false" label="Perform tests iteratively?"/> + </xml> + <xml name="sanitize_query" token_validinitial="string.printable"> + <sanitizer> + <valid initial="@VALIDINITIAL@"> + <remove value="'"/> + </valid> + <mapping initial="none"> + <add source="'" target="'"'"'"/> + </mapping> + </sanitizer> + </xml> + <xml name="citations"> + <citations> + <citation type="doi">10.1371/journal.pone.0067019</citation> + <citation type="doi">10.1186/2049-2618-2-15</citation> + <citation type="doi">10.1080/10618600.2015.1131161</citation> + </citations> + </xml> +</macros> +