Mercurial > repos > iuc > circos
annotate macros_tests.xml @ 12:290a11559985 draft
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
author | iuc |
---|---|
date | Mon, 22 Nov 2021 12:23:12 +0000 |
parents | 740057a5126d |
children | c4bde687c846 |
rev | line source |
---|---|
2
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
1 <?xml version="1.0"?> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
2 <macros> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
3 <xml name="test_cases"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
4 <tests> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
5 <test> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
6 <section name="reference_genome"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
7 <conditional name="ref"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
8 <param name="ref_source" value="history" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
9 <param name="genome_fasta" value="1/input.fa" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
10 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
11 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
12 |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
13 <section name="outputs"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
14 <param name="png" value="yes" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
15 <param name="svg" value="yes" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
16 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
17 |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
18 <output name="output_png" file="0/out.png" compare="sim_size" delta="15000" ftype="png"/> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
19 <output name="output_svg" file="0/out.svg" compare="sim_size" delta="15000" ftype="svg"/> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
20 </test> |
12
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
21 |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
22 <test expect_failure="true"> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
23 <section name="reference_genome"> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
24 <conditional name="ref"> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
25 <param name="ref_source" value="history" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
26 <param name="genome_fasta" value="1/input.fa" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
27 </conditional> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
28 </section> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
29 |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
30 <section name="outputs"> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
31 <param name="png" value="yes" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
32 <param name="svg" value="yes" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
33 </section> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
34 |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
35 <section name="limits"> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
36 <param name="max_ticks" value="1" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
37 <param name="max_ideograms" value="1" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
38 <param name="max_links" value="1" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
39 <param name="max_points_per_track" value="1" /> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
40 </section> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
41 |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
42 <output name="output_png" file="0/out.png" compare="sim_size" delta="15000" ftype="png"/> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
43 <output name="output_svg" file="0/out.svg" compare="sim_size" delta="15000" ftype="svg"/> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
44 </test> |
290a11559985
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit e3d1aad2204a3385aa66f3b0625747151e9f94e8"
iuc
parents:
6
diff
changeset
|
45 |
2
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
46 <test> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
47 <section name="reference_genome"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
48 <conditional name="ref"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
49 <param name="ref_source" value="history" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
50 <param name="genome_fasta" value="1/input.fa" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
51 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
52 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
53 |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
54 <section name="outputs"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
55 <param name="svg" value="yes" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
56 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
57 |
6
740057a5126d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a"
iuc
parents:
2
diff
changeset
|
58 <section name="ideogram"> |
740057a5126d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a"
iuc
parents:
2
diff
changeset
|
59 <param name="units" value="kb" /> |
740057a5126d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a"
iuc
parents:
2
diff
changeset
|
60 </section> |
2
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
61 |
6
740057a5126d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a"
iuc
parents:
2
diff
changeset
|
62 <section name="ticks"> |
2
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
63 <repeat name="tick_group"> |
6
740057a5126d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a"
iuc
parents:
2
diff
changeset
|
64 <param name="spacing" value="1" /> |
2
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
65 </repeat> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
66 <repeat name="tick_group"> |
6
740057a5126d
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 1584882716a1d2c598e8485da9d73bcf80d9b29a"
iuc
parents:
2
diff
changeset
|
67 <param name="spacing" value="5" /> |
2
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
68 <conditional name="ticks"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
69 <param name="show_tick_labels" value="yes" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
70 <param name="format" value="%.1f" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
71 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
72 </repeat> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
73 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
74 |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
75 <section name="sec_tdd"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
76 <repeat name="data"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
77 <param name="r0" value="0.8" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
78 <param name="r1" value="0.9" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
79 <conditional name="plot_format"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
80 <param name="plot_format_select" value="histogram" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
81 <param name="data_source" value="1/sine.tab" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
82 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
83 </repeat> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
84 <repeat name="data"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
85 <param name="r0" value="0.7" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
86 <param name="r1" value="0.8" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
87 <conditional name="plot_format"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
88 <param name="plot_format_select" value="scatter" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
89 <param name="data_source" value="1/sine.tab" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
90 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
91 </repeat> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
92 <repeat name="data"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
93 <param name="r0" value="0.6" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
94 <param name="r1" value="0.7" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
95 <conditional name="plot_format"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
96 <param name="plot_format_select" value="tile" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
97 <param name="data_source" value="1/tiles.bed" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
98 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
99 </repeat> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
100 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
101 |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
102 <section name="sec_links"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
103 <repeat name="data"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
104 <param name="radius" value="0.59" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
105 <param name="data_source" value="1/links.txt"/> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
106 <conditional name="linktype"> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
107 <param name="ribbon" value="yes" /> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
108 </conditional> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
109 </repeat> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
110 </section> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
111 |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
112 <!-- Outputs --> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
113 <output name="output_png" file="1/out.png" compare="sim_size" delta="15000" ftype="png"/> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
114 <output name="output_svg" file="1/out.svg" compare="sim_size" delta="15000" ftype="svg"/> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
115 </test> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
116 </tests> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
117 </xml> |
014a21767ac4
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/circos commit 076837a2e9c2b6ececcea4aa286ea7a412387a96"
iuc
parents:
diff
changeset
|
118 </macros> |