Mercurial > repos > iuc > dexseq
diff test-data/flattened.gtf @ 4:251393b72616 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/dexseq commit 56ac32067af9f3cd721a4caee469207b21bb3abf
| author | iuc |
|---|---|
| date | Tue, 11 Dec 2018 00:19:18 -0500 |
| parents | 6e8b61c54ff3 |
| children |
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--- a/test-data/flattened.gtf Sat Jul 28 03:44:02 2018 -0400 +++ b/test-data/flattened.gtf Tue Dec 11 00:19:18 2018 -0500 @@ -1,257 +1,281 @@ -4 dexseq_prepare_annotation.py aggregate_gene 68336 77667 . - . gene_id "FBgn0004859" -4 dexseq_prepare_annotation.py exonic_part 68336 71088 . - . transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 71142 71239 . - . transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 71240 71306 . - . transcripts "FBtr0306168+FBtr0089178"; gene_id "FBgn0004859"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 71371 71883 . - . transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 71940 72580 . - . transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 72643 73010 . - . transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 76457 76916 . - . transcripts "FBtr0308074+FBtr0089178"; gene_id "FBgn0004859"; exonic_part_number "007" -4 dexseq_prepare_annotation.py exonic_part 76917 76957 . - . transcripts "FBtr0308074+FBtr0089178+FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "008" -4 dexseq_prepare_annotation.py exonic_part 76958 77667 . - . transcripts "FBtr0306168"; gene_id "FBgn0004859"; exonic_part_number "009" -4 dexseq_prepare_annotation.py aggregate_gene 137015 150380 . - . gene_id "FBgn0011747" -4 dexseq_prepare_annotation.py exonic_part 137015 137256 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 137312 139127 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 139181 139405 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 139464 139557 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 140514 140838 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 141484 142425 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 142479 142582 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "007" -4 dexseq_prepare_annotation.py exonic_part 142935 144048 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "008" -4 dexseq_prepare_annotation.py exonic_part 144411 144518 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "009" -4 dexseq_prepare_annotation.py exonic_part 149948 150068 . - . transcripts "FBtr0089172+FBtr0089173+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "010" -4 dexseq_prepare_annotation.py exonic_part 150069 150078 . - . transcripts "FBtr0089173"; gene_id "FBgn0011747"; exonic_part_number "011" -4 dexseq_prepare_annotation.py exonic_part 150181 150353 . - . transcripts "FBtr0089172"; gene_id "FBgn0011747"; exonic_part_number "012" -4 dexseq_prepare_annotation.py exonic_part 150354 150380 . - . transcripts "FBtr0089172+FBtr0089171"; gene_id "FBgn0011747"; exonic_part_number "013" -4 dexseq_prepare_annotation.py aggregate_gene 522436 560418 . + . gene_id "FBgn0004607" -4 dexseq_prepare_annotation.py exonic_part 522436 522483 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 524477 524764 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 536208 536257 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 542099 543730 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 544957 545138 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 545530 547146 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 550319 551719 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "007" -4 dexseq_prepare_annotation.py exonic_part 551782 551784 . + . transcripts "FBtr0332913+FBtr0089070"; gene_id "FBgn0004607"; exonic_part_number "008" -4 dexseq_prepare_annotation.py exonic_part 551785 552005 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "009" -4 dexseq_prepare_annotation.py exonic_part 552062 552409 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "010" -4 dexseq_prepare_annotation.py exonic_part 553409 553411 . + . transcripts "FBtr0332913+FBtr0089070"; gene_id "FBgn0004607"; exonic_part_number "011" -4 dexseq_prepare_annotation.py exonic_part 553412 553552 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "012" -4 dexseq_prepare_annotation.py exonic_part 553609 556506 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "013" -4 dexseq_prepare_annotation.py exonic_part 557592 557701 . + . transcripts "FBtr0332913"; gene_id "FBgn0004607"; exonic_part_number "014" -4 dexseq_prepare_annotation.py exonic_part 557801 558386 . + . transcripts "FBtr0332913+FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "015" -4 dexseq_prepare_annotation.py exonic_part 558387 558999 . + . transcripts "FBtr0332913"; gene_id "FBgn0004607"; exonic_part_number "016" -4 dexseq_prepare_annotation.py exonic_part 559164 559230 . + . transcripts "FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "017" -4 dexseq_prepare_annotation.py exonic_part 559285 560418 . + . transcripts "FBtr0089070+FBtr0307167"; gene_id "FBgn0004607"; exonic_part_number "018" -4 dexseq_prepare_annotation.py aggregate_gene 718315 741787 . + . gene_id "FBgn0005558" -4 dexseq_prepare_annotation.py exonic_part 718315 718509 . + . transcripts "FBtr0089235"; gene_id "FBgn0005558"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 725703 725899 . + . transcripts "FBtr0089236+FBtr0100396"; gene_id "FBgn0005558"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 728055 728117 . + . transcripts "FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 728118 728297 . + . transcripts "FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 731543 731708 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 733119 733299 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 734484 735138 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "007" -4 dexseq_prepare_annotation.py exonic_part 737753 737926 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "008" -4 dexseq_prepare_annotation.py exonic_part 738280 738555 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "009" -4 dexseq_prepare_annotation.py exonic_part 739900 740254 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "010" -4 dexseq_prepare_annotation.py exonic_part 740948 741787 . + . transcripts "FBtr0089235+FBtr0089236+FBtr0100396+FBtr0100395"; gene_id "FBgn0005558"; exonic_part_number "011" -4 dexseq_prepare_annotation.py aggregate_gene 745030 796707 . + . gene_id "FBgn0005666" -4 dexseq_prepare_annotation.py exonic_part 745030 745117 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 746295 746655 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 747288 747309 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 747558 747588 . + . transcripts "FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 748087 748249 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 748730 748871 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 749299 749440 . + . transcripts "FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "007" -4 dexseq_prepare_annotation.py exonic_part 749628 749828 . + . transcripts "FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "008" -4 dexseq_prepare_annotation.py exonic_part 749900 750201 . + . transcripts "FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "009" -4 dexseq_prepare_annotation.py exonic_part 751403 751626 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "010" -4 dexseq_prepare_annotation.py exonic_part 751689 752091 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "011" -4 dexseq_prepare_annotation.py exonic_part 752186 752859 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "012" -4 dexseq_prepare_annotation.py exonic_part 753843 754190 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "013" -4 dexseq_prepare_annotation.py exonic_part 754546 754590 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "014" -4 dexseq_prepare_annotation.py exonic_part 754905 755027 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "015" -4 dexseq_prepare_annotation.py exonic_part 755104 755163 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "016" -4 dexseq_prepare_annotation.py exonic_part 755340 755438 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "017" -4 dexseq_prepare_annotation.py exonic_part 756141 756449 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "018" -4 dexseq_prepare_annotation.py exonic_part 756531 756656 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "019" -4 dexseq_prepare_annotation.py exonic_part 756775 756813 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "020" -4 dexseq_prepare_annotation.py exonic_part 756965 757141 . + . transcripts "FBtr0301340"; gene_id "FBgn0005666"; exonic_part_number "021" -4 dexseq_prepare_annotation.py exonic_part 757445 757672 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "022" -4 dexseq_prepare_annotation.py exonic_part 758362 758535 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "023" -4 dexseq_prepare_annotation.py exonic_part 759579 759614 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "024" -4 dexseq_prepare_annotation.py exonic_part 760575 760607 . + . transcripts "FBtr0301340"; gene_id "FBgn0005666"; exonic_part_number "025" -4 dexseq_prepare_annotation.py exonic_part 763029 763176 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "026" -4 dexseq_prepare_annotation.py exonic_part 763414 763787 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "027" -4 dexseq_prepare_annotation.py exonic_part 765792 765917 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "028" -4 dexseq_prepare_annotation.py exonic_part 765998 766697 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "029" -4 dexseq_prepare_annotation.py exonic_part 767102 767455 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "030" -4 dexseq_prepare_annotation.py exonic_part 767933 769645 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "031" -4 dexseq_prepare_annotation.py exonic_part 771196 772095 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "032" -4 dexseq_prepare_annotation.py exonic_part 772803 773566 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "033" -4 dexseq_prepare_annotation.py exonic_part 773651 773786 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "034" -4 dexseq_prepare_annotation.py exonic_part 773964 774854 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "035" -4 dexseq_prepare_annotation.py exonic_part 774913 777585 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "036" -4 dexseq_prepare_annotation.py exonic_part 778147 778428 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "037" -4 dexseq_prepare_annotation.py exonic_part 778491 778790 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "038" -4 dexseq_prepare_annotation.py exonic_part 778846 788316 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "039" -4 dexseq_prepare_annotation.py exonic_part 788388 789366 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "040" -4 dexseq_prepare_annotation.py exonic_part 789430 789771 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "041" -4 dexseq_prepare_annotation.py exonic_part 791179 792221 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "042" -4 dexseq_prepare_annotation.py exonic_part 793029 793085 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "043" -4 dexseq_prepare_annotation.py exonic_part 794643 794743 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "044" -4 dexseq_prepare_annotation.py exonic_part 794811 794937 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "045" -4 dexseq_prepare_annotation.py exonic_part 795003 795305 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "046" -4 dexseq_prepare_annotation.py exonic_part 795541 796707 . + . transcripts "FBtr0089793+FBtr0301340+FBtr0301341"; gene_id "FBgn0005666"; exonic_part_number "047" -4 dexseq_prepare_annotation.py aggregate_gene 1052110 1055183 . + . gene_id "FBgn0010217" -4 dexseq_prepare_annotation.py exonic_part 1052110 1052368 . + . transcripts "FBtr0333672"; gene_id "FBgn0010217"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 1052429 1052489 . + . transcripts "FBtr0333672"; gene_id "FBgn0010217"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 1052490 1052579 . + . transcripts "FBtr0089187+FBtr0333672+FBtr0089186"; gene_id "FBgn0010217"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 1053515 1053532 . + . transcripts "FBtr0333672"; gene_id "FBgn0010217"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 1053533 1053844 . + . transcripts "FBtr0089187+FBtr0333672+FBtr0089186"; gene_id "FBgn0010217"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 1053845 1053897 . + . transcripts "FBtr0089187"; gene_id "FBgn0010217"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 1053898 1055183 . + . transcripts "FBtr0089187+FBtr0333672+FBtr0089186"; gene_id "FBgn0010217"; exonic_part_number "007" -4 dexseq_prepare_annotation.py aggregate_gene 1077991 1084936 . - . gene_id "FBgn0011642" -4 dexseq_prepare_annotation.py exonic_part 1077991 1078198 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 1078259 1078263 . - . transcripts "FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 1078264 1078379 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "003" -4 dexseq_prepare_annotation.py exonic_part 1078433 1078665 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "004" -4 dexseq_prepare_annotation.py exonic_part 1078666 1078777 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "005" -4 dexseq_prepare_annotation.py exonic_part 1078778 1078781 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "006" -4 dexseq_prepare_annotation.py exonic_part 1078836 1079130 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "007" -4 dexseq_prepare_annotation.py exonic_part 1079727 1079914 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "008" -4 dexseq_prepare_annotation.py exonic_part 1079915 1079958 . - . transcripts "FBtr0309885+FBtr0309882+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "009" -4 dexseq_prepare_annotation.py exonic_part 1079959 1079977 . - . transcripts "FBtr0309885+FBtr0309882+FBtr0089214+FBtr0089216+FBtr0089211+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "010" -4 dexseq_prepare_annotation.py exonic_part 1080045 1080462 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0309882+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "011" -4 dexseq_prepare_annotation.py exonic_part 1081039 1081260 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "012" -4 dexseq_prepare_annotation.py exonic_part 1081261 1081279 . - . transcripts "FBtr0089216+FBtr0309885+FBtr0089211+FBtr0089212+FBtr0089215"; gene_id "FBgn0011642"; exonic_part_number "013" -4 dexseq_prepare_annotation.py exonic_part 1081280 1081285 . - . transcripts "FBtr0089212+FBtr0089215"; gene_id "FBgn0011642"; exonic_part_number "014" -4 dexseq_prepare_annotation.py exonic_part 1081365 1081366 . - . transcripts "FBtr0089215+FBtr0089216+FBtr0089213"; gene_id "FBgn0011642"; exonic_part_number "015" -4 dexseq_prepare_annotation.py exonic_part 1081367 1081398 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089216+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "016" -4 dexseq_prepare_annotation.py exonic_part 1081399 1081512 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089214+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "017" -4 dexseq_prepare_annotation.py exonic_part 1081513 1081542 . - . transcripts "FBtr0309885+FBtr0089213+FBtr0089210+FBtr0309884+FBtr0089216+FBtr0309883+FBtr0089211+FBtr0089215+FBtr0089212"; gene_id "FBgn0011642"; exonic_part_number "018" -4 dexseq_prepare_annotation.py exonic_part 1084871 1084936 . - . transcripts "FBtr0309882"; gene_id "FBgn0011642"; exonic_part_number "019" -4 dexseq_prepare_annotation.py aggregate_gene 1109444 1133943 . + . gene_id "FBgn0005561" -4 dexseq_prepare_annotation.py exonic_part 1109444 1109688 . + . transcripts "FBtr0089327+FBtr0089328+FBtr0100343+FBtr0100342"; gene_id "FBgn0005561"; exonic_part_number "001" -4 dexseq_prepare_annotation.py exonic_part 1112885 1113254 . + . transcripts "FBtr0089327+FBtr0089328+FBtr0100343+FBtr0100342"; gene_id "FBgn0005561"; exonic_part_number "002" -4 dexseq_prepare_annotation.py exonic_part 1116202 1116342 . + . transcripts "FBtr0089327+FBtr0089328+FBtr0100343+FBtr0100342"; 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exonic_part_number "001"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 393314 393483 . + . transcripts "FBtr0070086+FBtr0070087+FBtr0070081"; exonic_part_number "002"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 393882 394641 . + . transcripts "FBtr0070086+FBtr0070087+FBtr0070081"; exonic_part_number "003"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 394878 395007 . + . transcripts "FBtr0070083+FBtr0290017"; exonic_part_number "004"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 396018 396253 . + . transcripts "FBtr0290017+FBtr0290016+FBtr0070086+FBtr0070087+FBtr0070084+FBtr0070085+FBtr0070083+FBtr0070081"; exonic_part_number "005"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 396320 396799 . + . transcripts "FBtr0290017+FBtr0290016+FBtr0070086+FBtr0070087+FBtr0070084+FBtr0070085+FBtr0070083+FBtr0070081"; exonic_part_number "006"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 396869 396969 . + . transcripts "FBtr0290017+FBtr0290016+FBtr0070086+FBtr0070087+FBtr0070084+FBtr0070085+FBtr0070083+FBtr0070081"; 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exonic_part_number "013"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 401902 402467 . + . transcripts "FBtr0290017+FBtr0290016+FBtr0070087+FBtr0070084+FBtr0070083+FBtr0070081"; exonic_part_number "014"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py exonic_part 402468 403113 . + . transcripts "FBtr0070087+FBtr0070084+FBtr0070081+FBtr0070083+FBtr0290016"; exonic_part_number "015"; gene_id "FBgn0004648" +X dexseq_prepare_annotation.py aggregate_gene 403451 422067 . + . gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 403451 403467 . + . transcripts "FBtr0070088"; exonic_part_number "001"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 403468 403749 . + . transcripts "FBtr0333318+FBtr0070088"; exonic_part_number "002"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 403943 404146 . + . transcripts "FBtr0333318+FBtr0070088"; exonic_part_number "003"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 404208 404394 . + . transcripts "FBtr0333318+FBtr0070088"; exonic_part_number "004"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 420339 420534 . + . transcripts "FBtr0333318"; exonic_part_number "005"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 420535 420634 . + . transcripts "FBtr0333318+FBtr0070088"; exonic_part_number "006"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 421592 422061 . + . transcripts "FBtr0333318+FBtr0070088"; exonic_part_number "007"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py exonic_part 422062 422067 . + . transcripts "FBtr0333318"; exonic_part_number "008"; gene_id "FBgn0023535" +X dexseq_prepare_annotation.py aggregate_gene 403545 417259 . - . gene_id "FBgn0260400" +X dexseq_prepare_annotation.py exonic_part 403545 410882 . - . transcripts "FBtr0307173"; exonic_part_number "001"; gene_id "FBgn0260400" +X dexseq_prepare_annotation.py exonic_part 410883 411268 . - . transcripts "FBtr0307173+FBtr0100254"; exonic_part_number "002"; gene_id "FBgn0260400" +X dexseq_prepare_annotation.py exonic_part 411269 413275 . - . transcripts "FBtr0070091+FBtr0114366+FBtr0307173+FBtr0100254"; exonic_part_number "003"; gene_id "FBgn0260400" +X dexseq_prepare_annotation.py exonic_part 414110 414315 . - . transcripts "FBtr0100254"; exonic_part_number "004"; gene_id "FBgn0260400" +X dexseq_prepare_annotation.py exonic_part 415473 415729 . - . transcripts "FBtr0070091+FBtr0307173"; exonic_part_number "005"; gene_id "FBgn0260400" +X dexseq_prepare_annotation.py exonic_part 417019 417259 . - . transcripts "FBtr0070091+FBtr0114366+FBtr0307173"; exonic_part_number "006"; gene_id "FBgn0260400"