Mercurial > repos > iuc > funannotate_annotate

annotate macros.xml @ 12:732927f5b015 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/funannotate commit 8341270dd36185ebf59d15282bc79f1215e936a4
author iuc
date Fri, 07 Mar 2025 22:35:55 +0000
parents 9c15ca7e764e
children
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1 <?xml version="1.0"?>
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2 <macros>
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3 <token name="@TOOL_VERSION@">1.8.17</token>
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4 <token name="@VERSION_SUFFIX@">0</token>
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5 <xml name="biotools">
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6 <xrefs>
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7 <xref type="bio.tools">
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8 funannotate
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9 </xref>
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10 </xrefs>
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11 </xml>
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12 <xml name="requirements">
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13 <requirement type="package" version="@TOOL_VERSION@">funannotate</requirement>
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14 </xml>
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16 <xml name="citations">
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17 <citations>
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18 <citation type="doi">10.5281/zenodo.4054262</citation>
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19 </citations>
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20 </xml>
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21
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22 <xml name="busco_species">
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23 <options from_data_table="funannotate_options">
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24 <column name="value" index="0" />
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25 <column name="name" index="1" />
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26 <filter type="static_value" column="2" value="busco_db"/>
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27 <filter type="param_value" column="3" ref="database"/>
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28 <filter type="add_value" value="dikarya" name="Dikarya" index="0"/> <!-- this sets the default -->
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29 </options>
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30 </xml>
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33 <xml name="busco_seeds">
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34 <options from_data_table="funannotate_options">
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35 <column name="value" index="0" />
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36 <column name="name" index="1" />
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37 <filter type="static_value" column="2" value="trained_species"/>
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38 <filter type="param_value" column="3" ref="database"/>
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39 <yield/>
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40 </options>
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41 </xml>
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42 </macros>