Mercurial > repos > iuc > gatk2

annotate test-data/gatk/gatk_count_covariates/gatk_count_covariates_out_1.log.contains @ 0:340633249b3d draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author bgruening
date Mon, 02 Dec 2013 06:18:36 -0500
parents
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
340633249b3d Uploaded
bgruening
parents:
diff changeset
1 GenomeAnalysisEngine - Strictness is SILENT
340633249b3d Uploaded
bgruening
parents:
diff changeset
2 CountCovariatesWalker - The covariates being used here:
340633249b3d Uploaded
bgruening
parents:
diff changeset
3 CountCovariatesWalker - ReadGroupCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
4 CountCovariatesWalker - QualityScoreCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
5 CountCovariatesWalker - CycleCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
6 CountCovariatesWalker - DinucCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
7 CountCovariatesWalker - HomopolymerCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
8 CountCovariatesWalker - MinimumNQSCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
9 CountCovariatesWalker - PositionCovariate
340633249b3d Uploaded
bgruening
parents:
diff changeset
10 TraversalEngine - [INITIALIZATION COMPLETE; TRAVERSAL STARTING]
340633249b3d Uploaded
bgruening
parents:
diff changeset
11 CountCovariatesWalker - Writing raw recalibration data...
340633249b3d Uploaded
bgruening
parents:
diff changeset
12 CountCovariatesWalker - ...done!
340633249b3d Uploaded
bgruening
parents:
diff changeset
13 TraversalEngine - Total runtime