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view test-data/gatk/gatk_print_reads/gatk_print_reads_out_1.log.contains @ 6:35c00763cb5c draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/gatk2 commit cf399638ebca4250bcc15f468238a9964de97b33
author iuc
date Mon, 04 Jun 2018 05:38:15 -0400
parents 340633249b3d
children
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SAMDataSource$SAMReaders - Initializing SAMRecords in serial
TraversalEngine - [INITIALIZATION COMPLETE; TRAVERSAL STARTING]
TraversalEngine -        Location processed.reads  runtime per.1M.reads completed total.runtime remaining 
Walker - [REDUCE RESULT] Traversal result is: org.broadinstitute.sting.gatk.io.stubs.SAMFileWriterStub
TraversalEngine - 0 reads were filtered out during traversal out of 10 total (0.00%)