Mercurial > repos > iuc > humann2

comparison humann2.xml @ 5:bb13650e8115 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/humann2 commit 55eb503f50c54695ec36c3d4671c2b3e64d05f40"
author iuc
date Fri, 05 Feb 2021 18:28:51 +0000
parents 019864881779
children cda49fede0c2
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4:019864881779 5:bb13650e8115
1 <tool id="humann2" name="HUMAnN2" version="@WRAPPER_VERSION@.1"> 1 <tool id="humann2" name="HUMAnN2" version="@WRAPPER_VERSION@.2">
2 <description>to profile presence/absence and abundance of microbial pathways and gene families</description> 2 <description>to profile presence/absence and abundance of microbial pathways and gene families</description>
3 <macros> 3 <macros>
4 <import>humann2_macros.xml</import> 4 <import>humann2_macros.xml</import>
5 </macros> 5 </macros>
6 <stdio> 6 <expand macro="stdio"/>
7 <regex match="Failed to allocate sufficient memory." source="stderr" level="fatal_oom" description="Out of memory error occurred" /> 7 <expand macro="requirements">
8 </stdio>
9 <expand macro="requirements">
10 <requirement type="package" version="2.3.0">bowtie2</requirement> 8 <requirement type="package" version="2.3.0">bowtie2</requirement>
11 <requirement type="package" version="2.6.0">metaphlan2</requirement> 9 <requirement type="package" version="2.6.0">metaphlan2</requirement>
12 <requirement type="package" version="0.8.24">diamond</requirement> 10 <requirement type="package" version="0.8.24">diamond</requirement>
13 <requirement type="package" version="2.24">rapsearch</requirement> 11 <requirement type="package" version="2.24">rapsearch</requirement>
14 <requirement type="package" version="2.7.10">python</requirement> 12 <requirement type="package" version="2.7.10">python</requirement>