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changeset 5:28e82853c217 draft

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planemo upload for repository https://forgemia.inra.fr/ices_imes_analysis/icescreen commit 0460711184f579a316f4393e4cd0663886295d48
author iuc
date Thu, 27 Apr 2023 11:33:28 +0000
parents c5f7c311f1b0
children 85c9849b429e
files icescreen.xml test-data/NC_004668_137848_164286_detected_ME.summary test-data/NC_013798_298468_322494_NC_020450_643089_661957_detected_ME.summary
diffstat 3 files changed, 7 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/icescreen.xml	Tue Feb 28 14:10:38 2023 +0000
+++ b/icescreen.xml	Thu Apr 27 11:33:28 2023 +0000
@@ -1,7 +1,7 @@
 <tool id="icescreen" name="ICEscreen" version="@TOOL_VERSION@+galaxy@VERSION_SUFFIX@" profile="20.09">
     <description>detects and annotates ICEs (Integrative and Conjugative Elements) and IMEs (Integrative and Mobilizable Elements) in Firmicutes genomes.</description>
     <macros>
-        <token name="@TOOL_VERSION@">1.1.1</token>
+        <token name="@TOOL_VERSION@">1.2.0</token>
         <token name="@VERSION_SUFFIX@">0</token>
     </macros>
     <requirements>
--- a/test-data/NC_004668_137848_164286_detected_ME.summary	Tue Feb 28 14:10:38 2023 +0000
+++ b/test-data/NC_004668_137848_164286_detected_ME.summary	Thu Apr 27 11:33:28 2023 +0000
@@ -22,13 +22,14 @@
 Guest element:	0
 Element that are both host and guest:	0
 
-##### Signature proteins #####
+##### Signature proteins (SPs) #####
 ## Total SPs detected
 Total SPs:	4
 Total Integrase:	1
 Total Relaxase:	1
 Total Coupling protein:	1
 Total VirB4:	1
+Fragmented SPs:	0
 ## Unassigned SPs
 Unassigned SPs:	0
 Unassigned Integrase:	0
--- a/test-data/NC_013798_298468_322494_NC_020450_643089_661957_detected_ME.summary	Tue Feb 28 14:10:38 2023 +0000
+++ b/test-data/NC_013798_298468_322494_NC_020450_643089_661957_detected_ME.summary	Thu Apr 27 11:33:28 2023 +0000
@@ -22,13 +22,14 @@
 Guest element:	0
 Element that are both host and guest:	0
 
-##### Signature proteins #####
+##### Signature proteins (SPs) #####
 ## Total SPs detected
 Total SPs:	4
 Total Integrase:	1
 Total Relaxase:	1
 Total Coupling protein:	1
 Total VirB4:	1
+Fragmented SPs:	0
 ## Unassigned SPs
 Unassigned SPs:	0
 Unassigned Integrase:	0
@@ -60,13 +61,14 @@
 Guest element:	0
 Element that are both host and guest:	0
 
-##### Signature proteins #####
+##### Signature proteins (SPs) #####
 ## Total SPs detected
 Total SPs:	4
 Total Integrase:	1
 Total Relaxase:	1
 Total Coupling protein:	1
 Total VirB4:	1
+Fragmented SPs:	0
 ## Unassigned SPs
 Unassigned SPs:	0
 Unassigned Integrase:	0