Mercurial > repos > iuc > integron_finder

diff test-data/test5_integrons_table.tsv @ 3:bfd290fe1588 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/integron_finder commit cbb56e087d23446b8159622e2e4b7a709c8529ad
author iuc
date Fri, 14 Jun 2024 21:19:29 +0000
parents 392f100eebcd
children
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--- a/test-data/test5_integrons_table.tsv	Sun Feb 25 16:08:08 2024 +0000
+++ b/test-data/test5_integrons_table.tsv	Fri Jun 14 21:19:29 2024 +0000
@@ -1,4 +1,5 @@
-# cmd: integron_finder /tmp/tmpx8hgxvv4/files/f/5/6/dataset_f56693b9-7a23-459d-b14d-f33b5dbcd9cc.dat --cpu 1 --keep-tmp --promoter-attI -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40
+# integron_finder 2.0.5 
+# cmd: integron_finder /tmp/tmphy8ici_1/files/4/5/6/dataset_456847c3-0e81-4c5c-b3f2-6b14a0da2b45.dat --cpu 1 --keep-tmp --promoter-attI -dt 4000 --calin-threshold 2 --max-attc-size 200 --min-attc-size 40
 ID_integron	ID_replicon	element	pos_beg	pos_end	strand	evalue	type_elt	annotation	model	type	default	distance_2attC	considered_topology
 integron_01	ACBA.007.P01_13	Pc_int1	25	51	-1	NA	Promoter	Pc_1	NA	complete	Yes	NA	circ
 integron_01	ACBA.007.P01_13	ACBA.007.P01_13_1	55	1014	1	1.9e-25	protein	intI	intersection_tyr_intI	complete	Yes	NA	circ