Mercurial > repos > iuc > jbrowse

annotate test-data/bam/test.xml @ 17:ff11d442feed draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
author iuc
date Wed, 15 Nov 2017 15:15:27 -0500
parents 7342f467507b
children 8f33c9fbc119
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1 <?xml version="1.0"?>
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2 <root>
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3 <metadata>
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4 <gencode>11</gencode>
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5 <genomes>
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6 <genome>test-data/merlin.fa</genome>
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7 </genomes>
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ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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8 <general>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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9 <defaultLocation></defaultLocation>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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10 <trackPadding>40</trackPadding>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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11 <shareLink>true</shareLink>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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12 <aboutDescription></aboutDescription>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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13 <show_tracklist>true</show_tracklist>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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14 <show_nav>true</show_nav>
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15 <show_overview>false</show_overview>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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16 <show_menu>true</show_menu>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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17 <hideGenomeOptions>false</hideGenomeOptions>
ff11d442feed planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/jbrowse commit 908f16ea4eb082227437dc93e06e8cb742f5a257
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18 </general>
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19 </metadata>
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20 <tracks>
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21 <track cat="Default" format="pileup">
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22 <files>
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23 <trackFile path="test-data/bam/154.bam" ext="bam" label="Basic"/>
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24 </files>
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25 <options>
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26 <pileup>
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27 <auto_snp>false</auto_snp>
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28 <bam_indices>
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29 <bam_index>test-data/bam/154.bam.bai</bam_index>
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30 </bam_indices>
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31 </pileup>
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32 </options>
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33 </track>
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34 <track cat="Default" format="pileup">
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35 <files>
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36 <trackFile path="test-data/bam/154.bam" ext="bam" label="Auto-SNP"/>
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37 </files>
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38 <options>
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39 <pileup>
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40 <auto_snp>true</auto_snp>
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41 <bam_indices>
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42 <bam_index>test-data/bam/154.bam.bai</bam_index>
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43 </bam_indices>
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44 </pileup>
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45 </options>
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46 </track>
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47 </tracks>
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48 </root>