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diff test-data/last_align_prot.maf @ 4:8705e0d74a0f draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/last commit 6b601baaf89634bc8d110ea06e3e64c7a585f3ba"
author iuc
date Wed, 24 Mar 2021 22:36:50 +0000
parents 9a7e91fc6562
children f5a5a2b39ff2
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line diff
--- a/test-data/last_align_prot.maf	Fri Nov 13 09:05:49 2020 +0000
+++ b/test-data/last_align_prot.maf	Wed Mar 24 22:36:50 2021 +0000
@@ -1,8 +1,8 @@
-# LAST version 1021
+# LAST version 1205
 #
 # a=11 b=2 A=11 B=2 e=22 d=13 x=21 y=9 z=21 D=1e+06 E=2.73494e+09
 # R=10 u=0 s=1 S=0 M=0 T=0 m=10 l=1 L=999999999 n=10 k=1 w=1000 t=3.08611 j=3 Q=0
-# ref_db
+# /home/berntm/.planemo/planemo_tmp_y1t9frxe/test-data/hedgdb
 # Reference sequences=1 normal letters=411
 # lambda=0.305935 K=0.102404
 #
@@ -39,28 +39,4 @@
 # name start alnSize strand seqSize alignment
 #
 # batch 0
-a score=729 EG2=1.4e-80 E=1.2e-101
-s NP_002172.2    13 264 + 411 LVLLLLLVVPA----AWGCGPGRVVGSRRRPPRKLVPLAYKQFSPNVPEKTLGASGRYEGKIARSSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDRLNSLAISVMNQWPGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRNKYGLLARLAVEAGFDWVYYESKAHVHCSVKSEHSAAAKTGGCFPAGAQVRLESGARVALSAVRPGDRVLAMGEDGSPTFSDVLIFLDREPHRLRAFQVIETQDPPRRLALTPAHLL
-s NP_001034065.1 66 265 + 471 LVALLLIVLPMVFSPAHSCGPGRGLGRHRA--RNLYPLVLKQTIPNLSEYTNSASGPLEGVIRRDSPKFKDLVPNYNRDILFRDEEGTGADRLMSKRCKEKLNVLAYSVMNEWPGIRLLVTESWDEDYHHGQESLHYEGRAVTIATSDRDQSKYGMLARLAVEAGFDWVSYVSRRHIYCSVKSDSSISSHVHGCFTPESTALLESGVRKPLGELSIGDRVLSMTANGQAVYSEVILFMDRNLEQMQNFVQLHT-DGGAVLTVTPAHLV
-
-a score=131 EG2=0.4 E=4.1e-14
-s NP_002172.2    293 95 + 411 FASHVQPGQYVLVAGVPG--LQPARVAAVSTHVALGAYAPLTKHGTLVVEDVVASCFAAVADHHLAQLAFWPLRLFHSLAWGSWTPG-EGVHWYPQLL
-s NP_001034065.1 344 96 + 471 FADRIEEKNQVLVRDVETGELRPQRVVKVGSVRSKGVVAPLTREGTIVVNSVAASCYAVINSQSLAHWGLAPMRLLSTLE--AWLPAKEQLHSSPKVV
-
-a score=41 EG2=3.7e+11 E=0.06
-s NP_002172.2    91 34 + 411 KDEENTGADRLMTQRCKDRLNSLAISVMNQWPGV
-s NP_001034065.1 44 34 + 471 QEETQTMRHIAHTQRCLSRLTSLVALLLIVLPMV
-
-a score=30 EG2=1.1e+13 E=1.8
-s NP_002172.2    180 18 + 411 ESKAHVHCSVKSEHSAAA
-s NP_001034065.1  20 18 + 471 DAKCHSSSSSSSSKSAAS
-
-a score=24 EG2=6.6e+13 E=12
-s NP_002172.2     26 23 + 411 GCGPGRVVGSRRRPPRKLVPLAY
-s NP_001034065.1 150 21 + 471 GTGADRLMSKRCK--EKLNVLAY
-
-a score=24 EG2=6.6e+13 E=12
-s NP_002172.2    106 27 + 411 CKDRLNSLAISVMNQWPGVKLRVTEGW
-s NP_001034065.1 399 27 + 471 CYAVINSQSLAHWGLAPMRLLSTLEAW
-
 # Query sequences=1