view test-data/test_out_of_frame.out @ 2:6ad9d48a512e draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/migmap commit 60e2302cfac90d0c909ef61815aaaafaaad5816a
author iuc
date Mon, 17 Jun 2019 07:53:12 -0400
parents b2f1cf977ca9
children
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read.header	cdr3nt	cdr3aa	cdr.insert.qual	mutations.qual	v.segment	d.segment	j.segment	cdr1.start.in.read	cdr1.end.in.read	cdr2.start.in.read	cdr2.end.in.read	cdr3.start.in.read	cdr3.end.in.read	v.end.in.cdr3	d.start.in.cdr3	d.end.in.cdr3	j.start.in.cdr3	v.del	d.del.5	d.del.3	j.del	mutations.nt.FR1	mutations.nt.CDR1	mutations.nt.FR2	mutations.nt.CDR2	mutations.nt.FR3	mutations.nt.CDR3	mutations.nt.FR4	rc	complete	has.cdr3	in.frame	no.stop	mutations.aa.FR1	mutations.aa.CDR1	mutations.aa.FR2	mutations.aa.CDR2	mutations.aa.FR3	mutations.aa.CDR3	mutations.aa.FR4	pol.v	pol.d.5	pol.d.3	pol.j	canonical	contignt
>CGTTCAGTTCTTTTGCG|PRCONS=Human-IGHD|SEQORIENT=F|CREGION=Human-IGHD-InternalC|CONSCOUNT=1|DUPCOUNT=1	TGTGCGCCGGCTTGTGGTGGTGATTGCTATAGGACAACTGGTTCGACCCCTGG	CAPACGGDtg?L*DNWFDPW	IIIIIIII	IIIIIIIIIII	IGHV7-4-1*01	IGHD2-21*01	IGHJ5*01	174	198	249	273	384	437	6	11	30	33	3	6	3	0	S7:A>G,S18:T>G,S26:T>G,S49:C>A,S54:A>T,S58:T>G,S69:G>C	S94:A>C	S115:A>C			S332:T>C	S343:A>G	false	true	true	false	false	S2:Q>R,S6:S>A,S8:S>S,S16:S>*,S18:K>*,S19:V>G,S23:A>P	S31:Y>S	S38:Q>P			S110:T>T	S114:K>R	-1	-1	-1	-1	true	CAGGTGCGGCTGGTGCAAGCTGGGTCGGAGTTGAAGAAGCCTGGGGCCTAAGTGTAGGGTTCCTGCAAGCCTTCTGGATACACCTTCACTAGCTCTGCTATGAATTGGGTGCGACCGGCCCCTGGACAAGGGCTTGAGTGGATGGGATGGATCAACACCAACACTGGGAACCCAACGTATGCCCAGGGCTTCACAGGACGGTTTGTCTTCTCCTTGGACACCTCTGTCAGCACGGCATATCTGCAGATCTGCAGCCTAAAGGCTGAGGACACTGCCGTGTATTACTGTGCGCCGGCTTGTGGTGGTGATTGCTATAGGACAACTGGTTCGACCCCTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGCACCCACCAAGGCTCCGGATGTGTTCC