Mercurial > repos > iuc > package_cummerbund_2_8_2

comparison tool_dependencies.xml @ 3:f18bcdb8c6c5 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_cummerbund_2_8_2 commit f6a91dff96780be542371e30270e23f8aac65770
author iuc
date Sun, 24 May 2015 10:49:40 -0400
parents d9d166e54a21
children 13c270433440
comparison
equal deleted inserted replaced
2:d9d166e54a21 3:f18bcdb8c6c5
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="libcurl" version="7.35">
4 <repository changeset_revision="8fe20c4f5aff" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package>
3 <package name="R" version="3.1.2"> 6 <package name="R" version="3.1.2">
4 <repository changeset_revision="7cb487a32bde" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="6e0eee4ea4e1" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 8 </package>
6 <package name="cummeRbund" version="2.8.2"> 9 <package name="cummeRbund" version="2.8.2">
7 <install version="1.0"> 10 <install version="1.0">
8 <actions> 11 <actions>
9 <action type="setup_r_environment"> 12 <action type="setup_r_environment">
10 <repository changeset_revision="7cb487a32bde" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 13 <repository changeset_revision="6e0eee4ea4e1" name="package_r_3_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
11 <package name="R" version="3.1.2" /> 14 <package name="R" version="3.1.2" />
15 </repository>
16 <repository changeset_revision="8fe20c4f5aff" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu">
17 <package name="libcurl" version="7.35" />
12 </repository> 18 </repository>
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59 <package>https://depot.galaxyproject.org/package/noarch/GenomeInfoDb_1.2.4.tar.gz</package> 65 <package>https://depot.galaxyproject.org/package/noarch/GenomeInfoDb_1.2.4.tar.gz</package>
60 <package>https://depot.galaxyproject.org/package/noarch/XVector_0.6.0.tar.gz</package> 66 <package>http://bioarchive.s3.amazonaws.com/XVector_0.6.0.tar.gz</package>
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62 <package>https://depot.galaxyproject.org/package/noarch/zlibbioc_1.12.0.tar.gz</package> 68 <package>http://bioarchive.s3.amazonaws.com/zlibbioc_1.12.0.tar.gz</package>
63 <package>https://depot.galaxyproject.org/package/noarch/Biostrings_2.34.1.tar.gz</package> 69 <package>https://depot.galaxyproject.org/package/noarch/Biostrings_2.34.1.tar.gz</package>
64 <package>https://depot.galaxyproject.org/package/noarch/Rsamtools_1.18.2.tar.gz</package> 70 <package>https://depot.galaxyproject.org/package/noarch/Rsamtools_1.18.2.tar.gz</package>
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66 <package>https://depot.galaxyproject.org/package/noarch/Biobase_2.26.0.tar.gz</package> 72 <package>http://bioarchive.s3.amazonaws.com/Biobase_2.26.0.tar.gz</package>
67 <package>https://depot.galaxyproject.org/package/noarch/AnnotationDbi_1.28.1.tar.gz</package> 73 <package>https://depot.galaxyproject.org/package/noarch/AnnotationDbi_1.28.1.tar.gz</package>
68 <package>https://depot.galaxyproject.org/package/noarch/biomaRt_2.22.0.tar.gz</package> 74 <package>http://bioarchive.s3.amazonaws.com/biomaRt_2.22.0.tar.gz</package>
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70 <package>https://depot.galaxyproject.org/package/noarch/rtracklayer_1.26.2.tar.gz</package> 76 <package>https://depot.galaxyproject.org/package/noarch/rtracklayer_1.26.2.tar.gz</package>
71 <package>https://depot.galaxyproject.org/package/noarch/BSgenome_1.34.0.tar.gz</package> 77 <package>https://depot.galaxyproject.org/package/noarch/BSgenome_1.34.1.tar.gz</package>
72 <package>https://depot.galaxyproject.org/package/noarch/GenomicFeatures_1.18.3.tar.gz</package> 78 <package>https://depot.galaxyproject.org/package/noarch/GenomicFeatures_1.18.3.tar.gz</package>
73 <package>https://depot.galaxyproject.org/package/noarch/VariantAnnotation_1.12.7.tar.gz</package> 79 <package>https://depot.galaxyproject.org/package/noarch/VariantAnnotation_1.12.7.tar.gz</package>
74 <package>https://depot.galaxyproject.org/package/noarch/biovizBase_1.14.1.tar.gz</package> 80 <package>https://depot.galaxyproject.org/package/noarch/biovizBase_1.14.1.tar.gz</package>
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76 <package>https://depot.galaxyproject.org/package/noarch/cummeRbund_2.8.2.tar.gz</package> 82 <package>https://depot.galaxyproject.org/package/noarch/cummeRbund_2.8.2.tar.gz</package>