Mercurial > repos > iuc > package_eden_1_1

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
author iuc
date Tue, 19 May 2015 14:57:56 -0400
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345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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1 <?xml version="1.0"?>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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2 <tool_dependency>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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3 <!--<package name="boost" version="1.53.0">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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4 <repository name="package_boost_1_53" owner="iuc" prior_installation_required="True" />
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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5 </package>-->
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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6 <package name="zlib" version="1.2.8">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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7 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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8 </package>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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9 <package name="eden" version="1.1">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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10 <install version="1.0">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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11 <actions>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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12 <action type="download_by_url">https://github.com/bgruening/download_store/raw/master/EDeN/EDeN-1.1.0.tar.gz</action>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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13
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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14 <!-- populate the environment variables from the dependend repos -->
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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15 <action type="set_environment_for_install">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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16 <!--repository name="package_boost_1_53" owner="iuc">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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17 <package name="boost" version="1.53.0" />
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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18 </repository-->
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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19 <repository changeset_revision="63a4a902cda2" name="package_zlib_1_2_8" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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20 <package name="zlib" version="1.2.8" />
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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21 </repository>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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22 </action>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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23 <!--
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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24 <action type="shell_command">export LD_LIBRARY_PATH=$LD_LIBRARY_PATH:$BOOST_ROOT_DIR/lib/ &amp;&amp; make</action>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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25 -->
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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26 <action type="shell_command">make</action>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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27 <action type="move_file">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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28 <source>EDeN</source>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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29 <destination>$INSTALL_DIR/bin/</destination>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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30 </action>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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31 <action type="set_environment">
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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32 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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33 <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[BOOST_ROOT_DIR]/lib/</environment_variable>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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34 </action>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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35 </actions>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
iuc
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36 </install>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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37 <readme>Compiling EDeN requires a C++ compiler, usually g++.</readme>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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38 </package>
345f50e7572b planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eden_1_1 commit 0c094c3df9574cb057ccb65878f98f300d5b0a09
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39 </tool_dependency>