Mercurial > repos > iuc > package_jbrowse_1_11_6

annotate tool_dependencies.xml @ 0:d5ab749c9e97 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
author iuc
date Mon, 04 May 2015 17:19:56 -0400
parents
children 6cc678412457
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d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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1 <?xml version="1.0"?>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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2 <tool_dependency>
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3 <package name="perl" version="5.18.1">
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4 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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5 </package>
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6 <package name="jbrowse" version="1.11.6">
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7 <install version="1.0">
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8 <actions>
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9 <action type="download_by_url">http://jbrowse.org/wordpress/wp-content/plugins/download-monitor/download.php?id=99&amp;fmt=.zip</action>
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10 <action type="move_directory_files">
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11 <source_directory>.</source_directory>
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12 <destination_directory>$INSTALL_DIR</destination_directory>
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13 </action>
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14 <action type="setup_perl_environment">
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15 <repository changeset_revision="114b6af405fa" name="package_perl_5_18" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
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16 <package name="perl" version="5.18.1" />
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17 </repository>
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19 <package>https://cpan.metacpan.org/authors/id/P/PE/PEVANS/Scalar-List-Utils-1.42.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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20 <package>https://cpan.metacpan.org/authors/id/L/LE/LEONT/Test-Harness-3.35.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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21 <package>https://cpan.metacpan.org/authors/id/E/EX/EXODIST/Test-Simple-1.001014.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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22 <package>https://cpan.metacpan.org/authors/id/M/MA/MAKAMAKA/JSON-2.90.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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24 <package>https://cpan.metacpan.org/authors/id/F/FA/FAYS/Digest-Crc32-0.01.tar.gz</package>
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26 <package>https://cpan.metacpan.org/authors/id/G/GA/GARU/Clone-0.38.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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27 <package>https://cpan.metacpan.org/authors/id/R/RE/REHSACK/Hash-Merge-0.200.tar.gz</package>
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29 <package>https://cpan.metacpan.org/authors/id/S/SA/SAPER/XSLoader-0.16.tar.gz</package>
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30 <package>https://cpan.metacpan.org/authors/id/N/NW/NWCLARK/Devel-Size-0.80.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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32 <package>https://cpan.metacpan.org/authors/id/T/TH/THOSPEL/Heap-Simple-0.13.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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34 <package>https://cpan.metacpan.org/authors/id/N/NE/NEILB/Pod-Escapes-1.07.tar.gz</package>
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35 <package>https://cpan.metacpan.org/authors/id/J/JE/JESSE/Test-1.26.tar.gz</package>
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36 <package>https://cpan.metacpan.org/authors/id/M/MU/MUIR/modules/Text-Tabs+Wrap-2013.0523.tar.gz</package>
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37 <package>https://cpan.metacpan.org/authors/id/P/PE/PEVANS/Scalar-List-Utils-1.42.tar.gz</package>
d5ab749c9e97 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_jbrowse_1_11_6 commit 685773d3da40afdc4d14846d4935b3b0a100f56e
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38 <package>https://cpan.metacpan.org/authors/id/L/LE/LEONT/Test-Harness-3.35.tar.gz</package>
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39 <package>https://cpan.metacpan.org/authors/id/D/DA/DANKOGAI/Encode-2.73.tar.gz</package>
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40 <package>https://cpan.metacpan.org/authors/id/D/DW/DWHEELER/Pod-Simple-3.30.tar.gz</package>
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41 <package>https://cpan.metacpan.org/authors/id/T/TO/TODDR/Exporter-5.70.tar.gz</package>
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42 <package>https://cpan.metacpan.org/authors/id/S/SH/SHAY/perl-5.20.2.tar.gz</package>
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43 <package>https://cpan.metacpan.org/authors/id/E/EX/EXODIST/Test-Simple-1.001014.tar.gz</package>
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44 <package>https://cpan.metacpan.org/authors/id/C/CO/CORION/parent-0.232.tar.gz</package>
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45 <package>https://cpan.metacpan.org/authors/id/D/DL/DLAND/File-Path-2.09.tar.gz</package>
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46 <package>https://cpan.metacpan.org/authors/id/S/SA/SAPER/XSLoader-0.16.tar.gz</package>
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47 <package>https://cpan.metacpan.org/authors/id/R/RJ/RJBS/Carp-1.36.tar.gz</package>
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48 <package>https://cpan.metacpan.org/authors/id/D/DA/DAGOLDEN/File-Temp-0.2304.tar.gz</package>
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49 <package>https://cpan.metacpan.org/authors/id/M/MA/MAREKR/Pod-Usage-1.67.tar.gz</package>
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50 <package>https://cpan.metacpan.org/authors/id/R/RB/RBUELS/Bio-GFF3-2.0.tar.gz</package>
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52 <package>https://github.com/bgruening/download_store/raw/master/HeapSimpleXS/Heap-Simple-XS-0.10.tar.gz</package>
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53 </action>
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54 <action type="set_environment">
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55 <environment_variable action="set_to" name="JBROWSE_SOURCE_DIR">$INSTALL_DIR</environment_variable>
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56 </action>
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57 </actions>
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58 </install>
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59 <readme>Copy of the JBrowse source code, with dependencies
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60 </readme>
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61 </package>
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62 </tool_dependency>