Mercurial > repos > iuc > package_khmer_2_0

comparison tool_dependencies.xml @ 2:c02c1e1abd48 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/blob/master/tools/khmer/ commit 0d9b76366bdec662cfd283201ee957464d656632
author iuc
date Wed, 16 Dec 2015 08:48:57 -0500
parents 09e6ec4fbbe0
children
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1:09e6ec4fbbe0 2:c02c1e1abd48
4 <repository changeset_revision="73382c8fa8f3" name="package_bz2file_0_98" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="73382c8fa8f3" name="package_bz2file_0_98" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="screed" version="0.9"> 6 <package name="screed" version="0.9">
7 <repository changeset_revision="639e5e37404d" name="package_screed_0_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="639e5e37404d" name="package_screed_0_9" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="setuptools" version="19.0">
10 <repository changeset_revision="c5b7a807ab1e" name="package_setuptools_19_0" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
11 </package>
9 <package name="khmer" version="2.0"> 12 <package name="khmer" version="2.0">
10 <install version="1.0"> 13 <install version="1.0">
11 <actions> 14 <actions>
12 <action md5sum="1f610abd021254e21b082179a100cd39" type="download_by_url">https://pypi.python.org/packages/source/k/khmer/khmer-2.0.tar.gz</action> 15 <action md5sum="1f610abd021254e21b082179a100cd39" type="download_by_url">https://pypi.python.org/packages/source/k/khmer/khmer-2.0.tar.gz</action>
16 <action type="set_environment_for_install">
17 <repository changeset_revision="c5b7a807ab1e" name="package_setuptools_19_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
18 <package name="setuptools" version="19.0" />
19 </repository>
20 </action>
13 <action type="make_directory">$INSTALL_DIR/lib/python</action> 21 <action type="make_directory">$INSTALL_DIR/lib/python</action>
14 <action type="shell_command"> 22 <action type="shell_command">
15 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 23 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
16 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin 24 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
17 </action> 25 </action>