Mercurial > repos > iuc > package_lapack_3_4

annotate tool_dependencies.xml @ 2:e87b2acfb5d2 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
author iuc
date Tue, 07 Jun 2016 05:33:36 -0400
parents 5686c79a72d5
children 716579eca632
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
1 <?xml version="1.0"?>
0
98a7d116c15f initial upload
iuc
parents:
diff changeset
2 <tool_dependency>
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
3 <package name="cmake" version="3.2.3">
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
4 <repository changeset_revision="1aea698a1c63" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
5 </package>
0
98a7d116c15f initial upload
iuc
parents:
diff changeset
6 <package name="lapack" version="3.4.2">
98a7d116c15f initial upload
iuc
parents:
diff changeset
7 <install version="1.0">
98a7d116c15f initial upload
iuc
parents:
diff changeset
8 <actions>
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
9 <action sha256sum="60a65daaf16ec315034675942618a2230521ea7adf85eea788ee54841072faf0" type="download_by_url">https://depot.galaxyproject.org/software/lapack/lapack_3.4.2_src_all.tar.gz</action>
0
98a7d116c15f initial upload
iuc
parents:
diff changeset
10
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
11 <!-- compile both static and shared library -->
1
5686c79a72d5 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
iuc
parents: 0
diff changeset
12 <action type="shell_command">
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
13 mkdir build &amp;&amp;
1
5686c79a72d5 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit e10d6e2c4435771dc6f44d940359c1a31c0d6742-dirty
iuc
parents: 0
diff changeset
14 cd build &amp;&amp;
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
15 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DCMAKE_Fortran_FLAGS='-O2 -fPIC' &amp;&amp;
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
16 make &amp;&amp;
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
17 make install &amp;&amp;
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
18 cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/lapack -DBUILD_SHARED_LIBS=ON -DCMAKE_Fortran_FLAGS='-O2 -fPIC' &amp;&amp;
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
19 make &amp;&amp;
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
20 make install
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
21 </action>
0
98a7d116c15f initial upload
iuc
parents:
diff changeset
22 <action type="set_environment">
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
23 <environment_variable action="set_to" name="LAPACK_LIB_DIR">$INSTALL_DIR/lapack/lib</environment_variable>
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
24 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$INSTALL_DIR/lapack/lib</environment_variable>
0
98a7d116c15f initial upload
iuc
parents:
diff changeset
25 </action>
98a7d116c15f initial upload
iuc
parents:
diff changeset
26 </actions>
98a7d116c15f initial upload
iuc
parents:
diff changeset
27 </install>
2
e87b2acfb5d2 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_lapack_3_4 commit 8e222c088dac55ffcb28fd892dd8fea991791fda-dirty
iuc
parents: 1
diff changeset
28 <readme>LAPACK requires gcc, gfortran and cmake. LAPACK_LIB_DIR will be set (including liblapack.a and libblas.a). </readme>
0
98a7d116c15f initial upload
iuc
parents:
diff changeset
29 </package>
98a7d116c15f initial upload
iuc
parents:
diff changeset
30 </tool_dependency>