Mercurial > repos > iuc > package_numpy_1_9

comparison tool_dependencies.xml @ 5:842bb2f02723 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit bbfd77c34b609b86ef3a24525dae1127d8b3d99b
author iuc
date Mon, 02 May 2016 16:13:31 -0400
parents c8f7a7d73466
children 83d12e13dbbd
comparison
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4:c8f7a7d73466 5:842bb2f02723
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="atlas" version="3.10.2"> 3 <package name="atlas" version="3.10.2">
4 <repository changeset_revision="0538fd672119" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="f27d2f8761ae" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="python" version="2.7"> 6 <package name="python" version="2.7">
7 <repository changeset_revision="8b09fe018cac" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="8b09fe018cac" name="package_python_2_7" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="numpy" version="1.9"> 9 <package name="numpy" version="1.9">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action sha256sum="9753003ab7c489968eb260e5460556fd7d533a8e11a9d5326e0995bd1aa21318" type="download_by_url">https://depot.galaxyproject.org/software/numpy/numpy_1.9p1_src_all.tar.gz</action>
13 <action type="make_directory">$INSTALL_DIR/lib/python</action>
12 <action type="set_environment_for_install"> 14 <action type="set_environment_for_install">
13 <repository changeset_revision="0538fd672119" name="package_atlas_3_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 15 <repository changeset_revision="f27d2f8761ae" name="package_atlas_3_10" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
14 <package name="atlas" version="3.10.2" /> 16 <package name="atlas" version="3.10.2" />
15 </repository> 17 </repository>
16 </action> 18 </action>
17 <action type="setup_python_environment"> 19 <action type="shell_command">
18 <repository changeset_revision="8b09fe018cac" name="package_python_2_7" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 20 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
19 <package name="python" version="2.7" /> 21 export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
20 </repository> 22 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
21 <package md5sum="78842b73560ec378142665e712ae4ad9">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.1.tar.gz</package>
22 </action> 23 </action>
23 <action type="set_environment"> 24 <action type="set_environment">
24 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> 25 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
25 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 26 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
26 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable> 27 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable>