Mercurial > repos > iuc > package_raxml_8_2_4

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planemo upload commit 174be06d7c7e7789df16ea5d5068f20b21257a2f
author iuc
date Mon, 14 Nov 2016 14:03:20 -0500
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34be595fd2a9 planemo upload commit 174be06d7c7e7789df16ea5d5068f20b21257a2f
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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="raxml" version="8.2.4">
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4 <install version="1.0">
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5 <actions>
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6 <!-- Download source code -->
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7 <action type="download_by_url" sha256sum="e9fa4b3fe790094d832a640edc2b448890237dca0012d509d95be4cd4ef3d83b" target_filename="standard-RAxML-8.2.4.tar.gz">https://github.com/stamatak/standard-RAxML/archive/v8.2.4.tar.gz</action>
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8
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9 <!-- Build raxml -->
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10 <action type="shell_command">make -f Makefile.PTHREADS.gcc</action>
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11 <action type="shell_command">make -f Makefile.gcc</action>
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12 <!-- Install raxml -->
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13 <action type="move_file">
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14 <source>raxmlHPC-PTHREADS</source>
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15 <destination>$INSTALL_DIR/bin</destination>
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16 </action>
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17 <action type="move_file">
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18 <source>raxmlHPC</source>
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19 <destination>$INSTALL_DIR/bin</destination>
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20 </action>
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21
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22 <!-- Set environment for dependent repositories -->
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23 <action type="set_environment">
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24 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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25 </action>
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26 </actions>
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27 </install>
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28 </package>
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29 </tool_dependency>