Mercurial > repos > iuc > package_rpy2_2_3_6

comparison tool_dependencies.xml @ 2:5bd646006a15 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_rpy2_2_3_6 commit dfaab7cbfdee82c9fe4ff34ce02b42fc456b9db9-dirty
author iuc
date Sun, 13 Dec 2015 15:30:42 -0500
parents b95be27b8ebf
children
comparison
equal deleted inserted replaced
1:b95be27b8ebf 2:5bd646006a15
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="R_3_0_1" version="3.0.1"> 3 <package name="R" version="3.2.1">
4 <repository changeset_revision="59b82e6e0801" name="package_r_3_0_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="readline" version="6.2"> 6 <package name="readline" version="6.2">
7 <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://toolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="rpy2_2_3_6" version="2.3.6"> 9 <package name="rpy2" version="2.3.6">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action type="download_by_url">https://pypi.python.org/packages/source/r/rpy2/rpy2-2.3.6.tar.gz</action> 12 <action type="download_by_url">https://pypi.python.org/packages/source/r/rpy2/rpy2-2.3.6.tar.gz</action>
13 <action type="set_environment_for_install"> 13 <action type="set_environment_for_install">
14 <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 14 <repository changeset_revision="52d6f646b3b5" name="package_readline_6_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
15 <package name="readline" version="6.2" /> 15 <package name="readline" version="6.2" />
16 </repository> 16 </repository>
17 <repository changeset_revision="59b82e6e0801" name="package_r_3_0_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="d0bf97420fb5" name="package_r_3_2_1" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu">
18 <package name="R_3_0_1" version="3.0.1" /> 18 <package name="R" version="3.2.1" />
19 </repository> 19 </repository>
20 </action> 20 </action>
21 21
22 <action type="shell_command"> 22 <action type="shell_command">
23 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 23 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
25 export CPPFLAGS="-I$READLINE_INCLUDE_PATH" &amp;&amp; 25 export CPPFLAGS="-I$READLINE_INCLUDE_PATH" &amp;&amp;
26 python setup.py build --r-home $R_HOME --r-home-lib $R_HOME/lib install --install-lib $INSTALL_DIR/lib/python 26 python setup.py build --r-home $R_HOME --r-home-lib $R_HOME/lib install --install-lib $INSTALL_DIR/lib/python
27 </action> 27 </action>
28 <action type="set_environment"> 28 <action type="set_environment">
29 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> 29 <environment_variable action="append_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
30 <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[READLINE_LIB_PATH]</environment_variable>
31 <environment_variable action="append_to" name="LD_LIBRARY_PATH">$ENV[RHOME]/lib</environment_variable>
32 </action> 30 </action>
33 </actions> 31 </actions>
34 </install> 32 </install>
35 <readme>rpy2 is a redesign and rewrite of rpy. It is providing a low-level interface to R, a proposed high-level interface, including wrappers to graphical libraries, as well as R-like structures and functions. 33 <readme>rpy2 is a redesign and rewrite of rpy. It is providing a low-level interface to R, a proposed high-level interface, including wrappers to graphical libraries, as well as R-like structures and functions.
36 http://rpy.sourceforge.net/rpy2.html 34 http://rpy.sourceforge.net/rpy2.html