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1 <?xml version="1.0"?>
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2 <tool_dependency>
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3 <package name="squid" version="1.9g">
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4 <install version="1.0">
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5 <actions>
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6 <action type="download_by_url" target_filename="squid-1.9g.tar.gz">http://selab.janelia.org/software/squid/squid.tar.gz</action>
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7 <action type="autoconf">--enable-lfs</action>
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8 <action type="set_environment">
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9 <environment_variable name="LIBRARY_PATH" action="prepend_to">$INSTALL_DIR/lib</environment_variable>
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10 <environment_variable name="SQUID_ROOT_PATH" action="set_to">$INSTALL_DIR</environment_variable>
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11 <environment_variable name="C_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
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12 <environment_variable name="CPLUS_INCLUDE_PATH" action="prepend_to">$INSTALL_DIR/include</environment_variable>
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
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14 </action>
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15 </actions>
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16 </install>
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17 <readme>
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18 <![CDATA[
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19 SQUID - library of functions for biological sequence analysis
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20 Copyright (C) 1992-2002 Washington University School of Medicine
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21
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22 SQUID is a freely redistributable library of C code functions for
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23 sequence analysis. SQUID also includes a number of small utility
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24 programs.
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25
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26 To install squid, see the file:
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27 INSTALL -- instructions for installing the programs
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28
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29 If you have any questions about redistributing squid or using
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30 squid code in your own work, see the files:
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31 COPYRIGHT -- copyright notice, and information on my distribution policy
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32 LICENSE -- version 2 of the GNU Public License (see COPYRIGHT)
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33
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34 For a web page with more information on squid, see:
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35 http://www.genetics.wustl.edu/eddy/software/#squid
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36
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37 You can always download the latest stable release of squid from:
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38 ftp://ftp.genetics.wustl.edu/pub/eddy/software/squid.tar.gz
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39
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40 The development codebase is available by anonymous CVS:
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41 cvs -d :pserver:anonymous@skynet.wustl.edu:/repository/sre login
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42 (password "anonymous")
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43 cvs -d :pserver:anonymous@skynet.wustl.edu:/repository/sre checkout squid
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44
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45 If you encounter any bugs in this library, or you have any questions
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46 or comments, please e-mail me at the address below. Due to limited
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47 personal time, I may not respond, but I do read all my mail.
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48
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49 Sean Eddy
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50 eddy@genetics.wustl.edu
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51
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52 HHMI/Dept. of Genetics
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53 Washington University School of Medicine
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54 660 South Euclid Box 8232
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55 Saint Louis Missouri 63110
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56 USA
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57 ]]>
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58 </readme>
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59 </package>
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60 </tool_dependency>
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