Mercurial > repos > jackcurragh > ribogalaxy_bedgraphtobigwig
view bedGraphToBigWig/bedGraphToBigWig.xml @ 1:efb0f693d8b1 draft
Uploaded
author | jackcurragh |
---|---|
date | Wed, 18 May 2022 13:43:51 +0000 |
parents | 954fe50ebd55 |
children | 66f3a55ff2ec |
line wrap: on
line source
<tool id="bedGraphToBigWig" name="Convert a bed file to a BigWig" version="1.1"> <description>Converting your ribosome profile bed file to a bigwig which is used for track creation on GWIPS-Viz</description> <command><![CDATA[ $__tool_directory__/bedGraphToBigWig ${input1} ${input2} ${output1} ]]></command> <inputs> <param name="input1" type="data" format="bed" label="Bed File" /> <param name="input2" type="data" format="tabular" label="Chromosome Sizes" help="Check out 'Get Chromosome Sizes' to fill this parameter"/> </inputs> <outputs> <data name="output1" format="bigwig"/> </outputs> <tests> <test> <param name="input1" value="test.bed" ftype="bed" /> <param name="input2" value="test.chrom.sizes" ftype="tabular" /> <output name="output1" file="test.bw" ftype="bigwig" lines_diff="4" /> </test> </tests> <help> </help> <citations/> </tool>