Mercurial > repos > jackcurragh > ribogalaxy_get_chrom_sizes

changeset 25:3276016ac5b3 draft

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Uploaded
author jackcurragh
date Wed, 18 May 2022 10:35:44 +0000
parents feeee18b0084
children 185133c56545
files get_chrom_sizes/get_chrom_sizes.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/get_chrom_sizes/get_chrom_sizes.xml	Wed May 18 10:28:29 2022 +0000
+++ b/get_chrom_sizes/get_chrom_sizes.xml	Wed May 18 10:35:44 2022 +0000
@@ -1,5 +1,5 @@
 <tool id="get_chrom_sizes" name="Get Chromosome Sizes" version="2.2">
-    <description>Chromosome sizes are needed for the creation of ribosome profiles. This tool generates a tab delimited chrom.sizes file from an inputted fasta</description>
+    <description>Generates a tab delimited chrom.sizes file from an inputted fasta</description>
     <command>
         python $__tool_directory__/calculating_chrom.sizes.py ${refGenomeSource.genomeSource} ${input2}
             #if $refGenomeSource.genomeSource == "builtin":
@@ -7,8 +7,6 @@
             #else:
                 ${refGenomeSource.input1_file} none ${output1}
             #end if
-
-            
     </command>
     <inputs>
         <conditional name="refGenomeSource">
@@ -48,7 +46,9 @@
     <help>
 **What it does**
 
-Creates a chromosome sizes file from a fasta file. 
+Creates a chromosome sizes file from a fasta file. This is needed for creating ribosome profiles. 
+
+Some commonly used genomes are provided to save on storage.
     </help>
     <citations/>
 </tool>