Mercurial > repos > jackcurragh > ribogalaxy_get_chrom_sizes

changeset 19:4a020e3ddc1b draft

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Uploaded
author jackcurragh
date Tue, 17 May 2022 14:19:13 +0000
parents 06c2eaff31e5
children 147706e55621
files get_chrom_sizes/tool-data/builtin_fastas.loc.sample
diffstat 1 files changed, 6 insertions(+), 6 deletions(-) [+]
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line diff
--- a/get_chrom_sizes/tool-data/builtin_fastas.loc.sample	Tue May 17 14:00:40 2022 +0000
+++ b/get_chrom_sizes/tool-data/builtin_fastas.loc.sample	Tue May 17 14:19:13 2022 +0000
@@ -1,8 +1,8 @@
-mus_musculus_m28	m28	Mus musculus (m28) Genome	/data2/indices/bowtie/genome/mus_musculus_m28/mus_musculus_m28.fa.gz
-drosophila_melanogaster_dm6	dm6	Drosophila melanogaster (dm6) Genome	/data2/indices/bowtie/genome/drosophila_melanogater_dm6/dm6.fa.gz
+mus_musculus_m28	m28	Mus musculus (m28) Genome	/data2/indices/bowtie/genome/mus_musculus_m28/mus_musculus_m28.fa
+drosophila_melanogaster_dm6	dm6	Drosophila melanogaster (dm6) Genome	/data2/indices/bowtie/genome/drosophila_melanogater_dm6/dm6.fa
 sacCer_9	sacCer9	Saccharomyces cerevisiae (v9) Genome	/data2/indices/bowtie/genome/sacCer_9/S288C_reference_sequence_R9-1-1_19990210.fsa
 sarCer_3	sacCer3	Saccharomyces cerevisiae (v3) Genome	/data2/indices/bowtie/genome/sacCer_3/S288C_reference_sequence_R3-1-1_19970730.fsa
-E_coli_K12_MG1655	e_coli	Escherichia coli (K12 MG1655) Genome	/data2/indices/bowtie/genome/E_coli_K12_MG1655/GCF_003368535.1_ASM336853v1_genomic.fna.gz
-Arabidopsis	araThal	Arabidopsis thaliana (TAIR10) Genome	/data2/indices/bowtie/genome/Arabidopsis/GCF_000001735.4_TAIR10.1_genomic.fna.gz
-homo_sapiens_hg19	hg19	Homo sapiens (hg19) Genome	/data2/indices/bowtie/genome/homo_sapiens_hg19/hg19.fa.gz
-homo_sapiens_hg38	hg38	Homo sapiens (hg38) Genome	/data2/indices/bowtie/genome/homo_sapiens_hg38/hg38.fa.gz
\ No newline at end of file
+E_coli_K12_MG1655	e_coli	Escherichia coli (K12 MG1655) Genome	/data2/indices/bowtie/genome/E_coli_K12_MG1655/GCF_003368535.1_ASM336853v1_genomic.fna
+Arabidopsis	araThal	Arabidopsis thaliana (TAIR10) Genome	/data2/indices/bowtie/genome/Arabidopsis/GCF_000001735.4_TAIR10.1_genomic.fna
+homo_sapiens_hg19	hg19	Homo sapiens (hg19) Genome	/data2/indices/bowtie/genome/homo_sapiens_hg19/hg19.fa
+homo_sapiens_hg38	hg38	Homo sapiens (hg38) Genome	/data2/indices/bowtie/genome/homo_sapiens_hg38/hg38.fa
\ No newline at end of file