Mercurial > repos > jankanis > blast2html

annotate blast2html.html.jinja @ 115:0c2a03f9740b

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
make external gene bank name configurable
author Jan Kanis <jan.code@jankanis.nl>
date Mon, 14 Jul 2014 15:01:32 +0200
parents 5d3840a1635e
children 7f3f8c10f44b
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
73
67b1a319c6dc First go at 2.6 compatibility
Jan Kanis <jan.code@jankanis.nl>
parents: 67
diff changeset
1 {# -*- coding: utf-8 -*- #}
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
2 <!DOCTYPE html>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
3 <html>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
4 <head>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
5 <meta charset="UTF-8">
33
3bb5da68305e add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents: 27
diff changeset
6 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
7
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
8 <title>Blast output</title>
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
9
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
10 <style>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
11 body {
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
12 color: #333333;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
13 font-family: Arial,Sans-Serif;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
14 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
15
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
16 :link {
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
17 color: #336699;
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
18 }
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
19
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
20 .right {
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
21 float: right;
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
22 }
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
23
26
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
24 /* Galaxy with html sanitization enabled strips the header of this html page. If so, show the user a warning.*/
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
25 #strip_html_warning {
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
26 display: none;
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
27 }
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
28
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
29 #content {
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
30 margin: 0 2em;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
31 padding: 0.5em;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
32 border: 1px solid #888888;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
33 background-color: #d3dff5;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
34 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
35
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
36 h1, h2, h3, h4, h5, h6 {
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
37 color: #2A6979;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
38 font-family: arial,verdana,sans-serif;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
39 letter-spacing: -1px;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
40 margin: 1.2em 0 0.3em;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
41 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
42
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
43 h1 {
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
44 font-size: 200%;
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
45 }
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
46
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
47 h2 {
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
48 font-size: 150%;
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
49 }
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
50
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
51 h1, h2 {
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
52 border-bottom: 1px solid #CCCCCC;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
53 padding-bottom: 0.1em;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
54 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
55
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
56 h3 {
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
57 font-size: 120%;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
58 font-weight: bold;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
59 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
60
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
61 h5.darkHeader {
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
62 color: #4D4D4D;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
63 letter-spacing: 0;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
64 font-weight: bold;
113
5d3840a1635e adjust header size
Jan Kanis <jan.code@jankanis.nl>
parents: 112
diff changeset
65 font-size: 108%;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
66 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
67
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
68 #nodata {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
69 font-weight: bold;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
70 }
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
71
21
9596fea636bb style changes
Jan Kanis <jan.code@jankanis.nl>
parents: 20
diff changeset
72 .index {
9596fea636bb style changes
Jan Kanis <jan.code@jankanis.nl>
parents: 20
diff changeset
73 margin-bottom: 3em;
9596fea636bb style changes
Jan Kanis <jan.code@jankanis.nl>
parents: 20
diff changeset
74 }
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
75 .index div.indexentry {
21
9596fea636bb style changes
Jan Kanis <jan.code@jankanis.nl>
parents: 20
diff changeset
76 margin: 1.2em 1.6em;
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
77 font-weight: bold;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
78 font-size: 100%;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
79 }
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
80
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
81 .headerdata {
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
82 font-size: 90%;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
83 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
84 .headerdata .param {
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
85 font-weight: bold;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
86 text-align: right;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
87 padding: 0 1em;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
88 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
89
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
90 .grey {
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
91 background-color: #eeeeee;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
92 border: 1px solid #cccccc;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
93 padding: 1em;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
94 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
95
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
96 .white {
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
97 background-color: white;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
98 border: 1px solid #cccccc;
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
99 padding: 1.5em 2%;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
100 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
101
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
102 .graphicrow {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
103 clear: left;
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
104 width: 100%;
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
105 }
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
106
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
107 .graphicitem {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
108 float: left;
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
109 }
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
110
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
111
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
112
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
113 .graphics .grey {
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
114 text-align: center;
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
115 }
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
116
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
117 .graphic {
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
118 background-color: white;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
119 border: 2px solid black;
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
120 padding: 1.5em;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
121 margin: auto;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
122 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
123
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
124 .centered, .defline, div.legend, div.tablewrapper {
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
125 margin-left: auto;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
126 margin-right: auto;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
127 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
128
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
129 .defline {
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
130 background-color: white;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
131 border: 1px solid black;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
132 margin: .5em auto;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
133 padding-left: .2em;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
134 padding-right: .2em;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
135 max-width: 50em;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
136 text-align: left;
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
137 height: 2.8em;
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
138 overflow: hidden;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
139 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
140
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
141 div.legend {
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
142 max-width: 40em;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
143 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
144 div.legend div {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
145 width: 100%;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
146 color: white;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
147 font-weight: bold;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
148 border-spacing: 0;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
149 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
150 div.legend div .graphicitem {
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
151 width: 20%;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
152 padding: 0;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
153 margin: 0;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
154 border: none;
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
155 }
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
156
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
157 div.tablewrapper {
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
158 width: 50%;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
159 min-width: 60em;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
160 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
161
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
162 /* For small widths we give the graphic 100% */
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
163 @media (max-width: 72.5em) {
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
164 div.tablewrapper {
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
165 width: 100%;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
166 min-width: 0px;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
167 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
168 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
169
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
170 .scale {
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
171 width: 100%;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
172 margin: .5em 0;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
173 font-weight: bold;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
174 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
175 .scale div {
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
176 color: red;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
177 text-align: left;
6
d20ce91e1297 slight update
Jan Kanis <jan.code@jankanis.nl>
parents: 5
diff changeset
178 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
179 .scale .graphicrow {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
180 margin: .5em 0 .5em 0;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
181 color: white;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
182 }
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
183 .scale .graphicitem {
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
184 position: relative;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
185 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
186 .scale .graphicitem div {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
187 margin: 0 1px;
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
188 padding: 0 2px;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
189 text-align: right;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
190 background-color: red;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
191 color: white;
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
192 }
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
193 .scale .graphicitem:first-child div {
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
194 margin-left: 0px;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
195 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
196 .scale .graphicitem:last-child div {
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
197 margin-right: 0px;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
198 }
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
199 .scale .graphicitem .lastlabel {
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
200 position: absolute;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
201 top: 0px;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
202 left: 100%;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
203 background-color: transparent;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
204 color: red;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
205 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
206
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
207 a.matchresult {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
208 display: block;
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
209 margin: 0;
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
210 padding: 0;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
211 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
212 div.matchrow {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
213 margin-top: 4px;
6
d20ce91e1297 slight update
Jan Kanis <jan.code@jankanis.nl>
parents: 5
diff changeset
214 }
8
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
215 div.matchrow, div.matchitem {
beb83da5a6b7 div-ified graphics
Jan Kanis <jan.code@jankanis.nl>
parents: 7
diff changeset
216 height: 4px;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
217 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
218
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
219
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
220 table.descriptiontable {
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
221 font-size: 85%;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
222 border: 1px solid #97b0c8;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
223 border-spacing: 0;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
224 color: #222222;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
225 line-height: 1.3em;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
226 background-color: white;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
227 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
228 table.descriptiontable col:first-child {
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
229 width: 100%;
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
230 }
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
231 table.descriptiontable tr:hover {
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
232 background-color: #D5DEE3;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
233 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
234 table.descriptiontable th {
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
235 color: #14376C;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
236 font-weight: normal;
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
237 background-color: #F0F0F0;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
238 background: linear-gradient(#FFFFFF, #F0F0F0);
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
239 border-bottom: 1px solid #D4DFE9;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
240 border-right: 1px solid #CFCFCF;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
241 border-left: 0px solid black;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
242 border-top: 0px solid black;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
243 }
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
244 table.descriptiontable td {
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
245 overflow: hidden;
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
246 text-align: center;
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
247 padding: .4em .8em;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
248 }
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
249 table.descriptiontable td div {
9
bbdc8fb0de2b fix descriptiontable width
Jan Kanis <jan.code@jankanis.nl>
parents: 8
diff changeset
250 width: 1em;
bbdc8fb0de2b fix descriptiontable width
Jan Kanis <jan.code@jankanis.nl>
parents: 8
diff changeset
251 overflow: visible;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
252 white-space: nowrap;
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
253 text-align: left;
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
254 }
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
255
7
9e7927673089 intermediate commit before converting some tables to divs
Jan Kanis <jan.code@jankanis.nl>
parents: 6
diff changeset
256
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
257
17
8e61627a87f1 make html more semantic
Jan Kanis <jan.code@jankanis.nl>
parents: 16
diff changeset
258 .alignments .white {
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
259 padding: 1.5em 1em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
260 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
261
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
262 .alignment {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
263 border-top: 1px solid black;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
264 padding-left: 1em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
265 padding-right: 1em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
266 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
267
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
268 div.linkheader {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
269 padding-top: .2em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
270 font-size: 85%;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
271 color: #14376C;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
272 }
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
273 div.linkheader a.linkheader {
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
274 margin-right: 1em;
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
275 }
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
276 div.linkheader .right a {
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
277 text-decoration: none;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
278 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
279
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
280 .title .hittitle {
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
281 color: #222222;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
282 margin-bottom: .3em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
283 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
284 .title .titleinfo {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
285 font-size: 80%;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
286 margin-top: 0;
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
287 margin-bottom: .3em;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
288 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
289 .title .titleinfo .b {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
290 color: #606060;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
291 font-weight: bold;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
292 font-size: 90%;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
293 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
294
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
295 .moretitles {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
296 margin: 1.2em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
297 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
298 .moretitles .titleinfo {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
299 margin: 0;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
300 padding: 0;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
301 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
302 .moretitles .hittitle {
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
303 margin: .4em 0 .2em 0;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
304 padding: 0;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
305 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
306
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
307 a.showmoretitles {
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
308 font-size: 75%;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
309 color: #336699;
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
310 font-weight: bold;
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
311 margin-top: 0;
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
312 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
313 a.showmoretitles:hover {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
314 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
315
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
316 .hotspot {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
317 color: #606060;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
318 font-family: verdana, arial, sans-serif;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
319 margin-bottom: 2.5em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
320 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
321
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
322 .hotspot p.range {
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
323 font-size: 70%;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
324 margin-top: 0;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
325 margin-top: 1em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
326 margin-bottom: .2em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
327 }
12
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
328 .hotspot p.range span.range {
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
329 font-weight: bold;
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
330 }
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
331 .hotspot p.range a.range {
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
332 margin-left: .5em;
a459c754cdb5 add links, refactor, proper commandline arguments
Jan Kanis <jan.code@jankanis.nl>
parents: 11
diff changeset
333 }
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
334
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
335 table.hotspotstable {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
336 border-top: 1px solid;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
337 border-bottom: 1px solid;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
338 text-align: left;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
339 border-collapse: collapse;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
340 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
341 table.hotspotstable th, table.hotspotstable td {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
342 padding: .1em 1em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
343 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
344 table.hotspotstable th {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
345 font-size: 70%;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
346 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
347 table.hotspotstable td {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
348 min-width: 7em;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
349 color: #222222;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
350 font-size: 80%;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
351 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
352
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
353 pre.alignmentgraphic {
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
354 color: #222222;
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
355 }
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
356
23
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
357 footer {
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
358 text-align: center;
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
359 color: #cccccc;
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
360 font-size: 70%;
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
361 margin-top: 1em;
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
362 }
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
363 footer :link {
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
364 color: #5588cc;
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
365 }
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
366
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
367 </style>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
368
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
369 <script type="text/javascript">
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
370 function toggle_visibility(id) {
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
371 var e = document.getElementById(id);
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
372 if(e.style.display != 'block')
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
373 e.style.display = 'block';
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
374 else
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
375 e.style.display = 'none';
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
376 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
377 </script>
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
378
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
379 </head>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
380
11
7660519f2dc9 proper layout for alignments, added some links
Jan Kanis <jan.code@jankanis.nl>
parents: 10
diff changeset
381
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
382 <body>
27
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
383
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
384 <div id="strip_html_warning">
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
385 <!-- This div should be hidden by the header css block. Galaxy
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
386 strips all css, breaking this page but making this warning
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
387 visible. This warning contains some ugly old skool tabular html
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
388 layout that is not stripped. -->
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
389 <table bgcolor="#FFE5C9"><tr><td><font color="red"><b>
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
390 <font size=5><center>This html page seems to have been stripped by Galaxy.</center></font>
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
391 Disable Galaxy's html sanitization feature to view the full page (see <font face=monospace>sanitize_all_html</font> in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy
Jan Kanis <jan.code@jankanis.nl>
parents: 26
diff changeset
392 </b></font></td></tr></table>
26
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
393 </div>
eee23a36c582 add a warning if galaxy strips the html header/stylesheet
Jan Kanis <jan.code@jankanis.nl>
parents: 24
diff changeset
394
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
395 <div id=content>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
396
110
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
397 <section class=header>
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
398
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
399 <h1>Nucleotide Blast results</h1>
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
400
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
401 <table class=headerdata>
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
402 {% for param, value in params %}
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
403 <tr><td class=param>{{param}}:</td><td>{{value}}</td></tr>
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
404 {% endfor %}
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
405 </table>
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
406
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
407 </section>
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
408
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
409 {% if not blast.BlastOutput_iterations.findall('Iteration') %}
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
410 <section class=nodata>
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
411 <h2>No data</h2>
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
412 <div class=grey>
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
413 No matches
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
414 </div>
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
415 </section>
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
416
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
417 {% else %}
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
418
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
419 {% if blast.BlastOutput_iterations.findall('Iteration') | length > 1 %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
420 <section class=index>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
421 <h2>Queries</h2>
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
422
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
423 {% for result in blast.BlastOutput_iterations.Iteration %}
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
424 <div class=indexentry><a href="#match{{result|nodeid}}">
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
425 {% set hits = result|hits %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
426 {{result['Iteration_query-ID']}}: {{result['Iteration_query-def']}}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
427 ({{result|len}} letters, {{hits|length}} hits)
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
428 </a></div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
429 {% endfor %}
21
9596fea636bb style changes
Jan Kanis <jan.code@jankanis.nl>
parents: 20
diff changeset
430
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
431 </section>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
432 {% endif %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
433
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
434 {% for result in blast.BlastOutput_iterations.Iteration %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
435
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
436 <section class=match id=match{{result|nodeid}}>
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
437
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
438 <h2>Nucleotide Sequence ({{result|len}} letters)</h2>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
439
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
440 <section class=header>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
441
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
442 <table class=headerdata>
110
e17aae23cc1c report query parameters for each query
Jan Kanis <jan.code@jankanis.nl>
parents: 96
diff changeset
443 {% for param, value in result|params %}
23
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
444 <tr><td class=param>{{param}}:</td><td>{{value}}</td></tr>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
445 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
446 </table>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
447
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
448 </section>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
449
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
450 {% set hits = result|hits %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
451 {% if not hits %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
452 <section>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
453 <h3>No Hits</h3>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
454 <div class=grey>
24
c8347745bbad use Iteration_message tag; also work with unexpected Hit_id values
Jan Kanis <jan.code@jankanis.nl>
parents: 23
diff changeset
455 <table class=headerdata>
c8347745bbad use Iteration_message tag; also work with unexpected Hit_id values
Jan Kanis <jan.code@jankanis.nl>
parents: 23
diff changeset
456 <tr><td class=param>Message:</td><td>{{result.Iteration_message}}</td></tr>
c8347745bbad use Iteration_message tag; also work with unexpected Hit_id values
Jan Kanis <jan.code@jankanis.nl>
parents: 23
diff changeset
457 </table>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
458 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
459 </section>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
460 {% else %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
461
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
462 <section class=graphics>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
463 <h3>Graphic Summary</h3>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
464
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
465 <div class=grey>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
466 <h4 class=centered>Distribution of {{result|length}} Blast Hits on the Query Sequence</h4>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
467
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
468 <div class=defline id=defline{{result|nodeid}}>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
469 Mouse-over to show defline and scores, click to show alignments
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
470 </div>
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
471
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
472 <div class=graphic>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
473 <h5 class=darkHeader>Color key for alignment scores</h5>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
474 <div class=legend><div class=graphicrow>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
475 <div class=graphicitem style="background-color: {{colors[0]}}">&lt;40</div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
476 <div class=graphicitem style="background-color: {{colors[1]}}">40–50</div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
477 <div class=graphicitem style="background-color: {{colors[2]}}">50–80</div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
478 <div class=graphicitem style="background-color: {{colors[3]}}">80–200</div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
479 <div class=graphicitem style="background-color: {{colors[4]}}">200≤</div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
480 </div></div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
481 <div style="clear: left"></div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
482
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
483 <div class=tablewrapper>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
484
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
485 <div class=scale>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
486 <div>query:</div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
487 <div class=graphicrow>
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
488 <div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
489 {% for s in result|queryscale %}
76
7d0d46168fd5 Format all numbers in a predictable way
Jan Kanis <jan.code@jankanis.nl>
parents: 75
diff changeset
490 <div class=graphicitem style="width: {{s.width|numfmt}}%">
20
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
491 {% if s.width > 3.0 %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
492 <div>{{s.label}}</div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
493 {% else %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
494 <div>&nbsp;</div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
495 <div class=lastlabel>{{s.label}}</div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
496 {% endif %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
497 </div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case
Jan Kanis <jan.code@jankanis.nl>
parents: 19
diff changeset
498 {% endfor %}
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
499 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
500 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
501 <div style="clear: left"></div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
502 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
503
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
504 {% for line in result|match_colors %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
505 <a class=matchresult
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
506 href="#hit{{line.hit|nodeid}}"
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
507 onmouseover='document.getElementById("defline{{result|nodeid}}").innerHTML="{{line.defline|js_string_escape}}"'
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
508 onmouseout='document.getElementById("defline{{result|nodeid}}").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
509 title="{{line.defline}}">
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
510 <div class="matchrow graphicrow">
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
511 {% for hit in line.colors %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
512 <div class="matchitem graphicitem"
76
7d0d46168fd5 Format all numbers in a predictable way
Jan Kanis <jan.code@jankanis.nl>
parents: 75
diff changeset
513 style="background-color: {{hit[1]}}; width: {{hit[0]|numfmt}}%"></div>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
514 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
515 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
516 </a>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
517
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
518 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
519 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
520 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
521 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
522 </section>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
523
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
524
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
525
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
526 <section class=descriptions>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
527 <h3>Descriptions</h3>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
528
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
529 <div class=grey><div class=white>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
530 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
531
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
532 <table class=descriptiontable>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
533 <col/><col/><col/><col/><col/><col/><col/>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
534 <tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
535 <th>Description</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
536 <th>Max score</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
537 <th>Total score</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
538 <th>Query cover</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
539 <th>E value</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
540 <th>Ident</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
541 <th>Accession</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
542 </tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
543 {% for hit in result|hit_info %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
544 <tr>
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
545 <td><div><a href="#hit{{hit.hit|nodeid}}"
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
546 title="{{hit.title}}"
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
547 id="description{{hit.hit|nodeid}}">
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
548 {{hit.title}}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
549 </a></div></td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
550 <td>{{hit.maxscore}}</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
551 <td>{{hit.totalscore}}</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
552 <td>{{hit.cover}}</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
553 <td>{{hit.e_value}}</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
554 <td>{{hit.ident}}</td>
95
4378d11f0ed7 implement configurable gene bank links
Jan Kanis <jan.code@jankanis.nl>
parents: 76
diff changeset
555 <td>{{hit.hit|genelink(hit.hit.Hit_accession)}}</td>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
556 </tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
557 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
558 </table>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
559
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
560 </div></div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
561 </section>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
562
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
563
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
564
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
565 <section class=alignments>
111
7aa28753d7b3 create document-wide h1 header, put other headers one size down
Jan Kanis <jan.code@jankanis.nl>
parents: 110
diff changeset
566 <h3>Alignments</h3>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
567
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
568 <div class=grey><div class=white>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
569 {% for hit in hits %}
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
570 <div class=alignment id=hit{{hit|nodeid}}>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
571
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
572 <div class=linkheader>
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
573 <div class=right><a href="#description{{hit|nodeid}}">Descriptions</a></div>
115
0c2a03f9740b make external gene bank name configurable
Jan Kanis <jan.code@jankanis.nl>
parents: 113
diff changeset
574 {{ hit|genelink(text_from='dbname', cssclass='linkheader', display_nolink=False) }}
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
575 </div>
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
576
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
577 <div class=title>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
578 <p class=hittitle>{{hit|firsttitle}}</p>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
579 <p class=titleinfo>
95
4378d11f0ed7 implement configurable gene bank links
Jan Kanis <jan.code@jankanis.nl>
parents: 76
diff changeset
580 <span class=b>Sequence ID:</span> {{ hit|genelink }}
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
581 <span class=b>Length:</span> {{hit.Hit_len}}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
582 <span class=b>Number of Matches:</span> {{hit.Hit_hsps.Hsp|length}}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
583 </p>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
584 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
585
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
586 {% if hit|othertitles|length %}
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
587 <a class=showmoretitles onclick="toggle_visibility('moretitles{{hit|nodeid|js_string_escape}}'); return false;" href=''>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
588 See {{hit|othertitles|length}} more title(s)
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
589 </a>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
590
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
591 <div class=moretitles id=moretitles{{hit|nodeid}} style="display: none">
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
592 {% for title in hit|othertitles %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
593 <div class=title>
96
02b795b784e1 fix bug; add comments
Jan Kanis <jan.code@jankanis.nl>
parents: 95
diff changeset
594 <p class=hittitle>{{title.Hit_def}}</p>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
595 <p class=titleinfo>
95
4378d11f0ed7 implement configurable gene bank links
Jan Kanis <jan.code@jankanis.nl>
parents: 76
diff changeset
596 <span class=b>Sequence ID:</span> {{ title|genelink }}
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
597 </p>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
598 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
599 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
600 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
601 {% endif %}
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
602
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
603 {% for hsp in hit.Hit_hsps.Hsp %}
53
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations
Jan Kanis <jan.code@jankanis.nl>
parents: 33
diff changeset
604 <div class=hotspot id=hotspot{{hsp|nodeid}}>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
605 <p class=range>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
606 <span class=range>Range {{hsp.Hsp_num}}: {{hsp['Hsp_hit-from']}} to {{hsp['Hsp_hit-to']}}</span>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
607 </p>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
608
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
609 <table class=hotspotstable>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
610 <tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
611 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
612 </tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
613 <tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
614 <td>{{hsp['Hsp_bit-score']|fmt('.1f')}} bits({{hsp.Hsp_score}})</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
615 <td>{{hsp.Hsp_evalue|fmt('.1f')}}</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
616 <td>{{ hsp.Hsp_identity }}/{{ hsp|len }}({{
75
4d2c25baf5a3 Fix rounding errors
Jan Kanis <jan.code@jankanis.nl>
parents: 73
diff changeset
617 ((hsp.Hsp_identity|float)/hsp|len) | fmt('.0%') }})</td>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
618 <td>{{ hsp.Hsp_gaps }}/{{ hsp|len
75
4d2c25baf5a3 Fix rounding errors
Jan Kanis <jan.code@jankanis.nl>
parents: 73
diff changeset
619 }}({{ ((hsp.Hsp_gaps|float) / hsp|len) | fmt('.0%') }})</td>
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
620 <td>{{ hsp['Hsp_query-frame']|asframe }}/{{ hsp['Hsp_hit-frame']|asframe }}</td>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
621 </tr>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
622 </table>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
623
67
19c48f2ec775 wrap alignments if they are too long
Jan Kanis <jan.code@jankanis.nl>
parents: 53
diff changeset
624 {% for alignment_line in hsp|alignment_pre %}
19c48f2ec775 wrap alignments if they are too long
Jan Kanis <jan.code@jankanis.nl>
parents: 53
diff changeset
625 <pre class=alignmentgraphic>{{alignment_line}}</pre>
19c48f2ec775 wrap alignments if they are too long
Jan Kanis <jan.code@jankanis.nl>
parents: 53
diff changeset
626 {% endfor %}
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
627 </div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
628 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
629
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
630 </div>
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
631
19
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
632 {% endfor %}
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
633 </div></div>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
634 </section>
67ddcb807b7d make it work with multiple queries
Jan Kanis <jan.code@jankanis.nl>
parents: 17
diff changeset
635 {% endif %}
23
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
636 </section>
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
637 {% endfor %}
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
638 {% endif %}
10
2fbdf2eb27b4 All data is displayed now, still some formatting to do
Jan Kanis <jan.code@jankanis.nl>
parents: 9
diff changeset
639
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
640 </div>
23
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
641
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
642 <footer>
33
3bb5da68305e add test update script, add url to github page
Jan Kanis <jan.code@jankanis.nl>
parents: 27
diff changeset
643 This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
23
6995a6f34f3f fix sectioning, add footer
Jan Kanis <jan.code@jankanis.nl>
parents: 22
diff changeset
644 </footer>
5
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
645 </body>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
646 </html>
1df2bfce5c24 first features are working, partial match table
Jan Kanis <jan.code@jankanis.nl>
parents:
diff changeset
647
16
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
648 {#
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
649 Local Variables:
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
650 tab-width: 2
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
651 indent-tabs-mode: nil
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
652 End:
db7e4ee3be03 fix validation, reindent
Jan Kanis <jan.code@jankanis.nl>
parents: 13
diff changeset
653 #}