blast2html: blast2html.html.jinja annotate

annotate blast2html.html.jinja @ 127:532aa200dbe9

Version 1.0: Include documentation, license, etc. No code changes Update README, put appropriate text in the <help> section, add a <citation> tag.

author	Jan Kanis <jan.code@jankanis.nl>
date	Thu, 23 Jul 2015 12:08:51 +0200
parents	0fa962dd83b4
children

rev	line source
126 0fa962dd83b4 Add README and license Jan Kanis <jan.code@jankanis.nl> parents: 124 diff changeset	1 {# -- coding: utf-8 --
0fa962dd83b4 Add README and license Jan Kanis <jan.code@jankanis.nl> parents: 124 diff changeset	2
0fa962dd83b4 Add README and license Jan Kanis <jan.code@jankanis.nl> parents: 124 diff changeset	3 Copyright The Hyve B.V. 2014-2015
0fa962dd83b4 Add README and license Jan Kanis <jan.code@jankanis.nl> parents: 124 diff changeset	4 License: GPL version 3 or (at your option) any higher version
0fa962dd83b4 Add README and license Jan Kanis <jan.code@jankanis.nl> parents: 124 diff changeset	5 #}
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	6 <!DOCTYPE html>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	7 <html>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	8 <head>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	9 <meta charset="UTF-8">
33 3bb5da68305e add test update script, add url to github page Jan Kanis <jan.code@jankanis.nl> parents: 27 diff changeset	10 <meta name=generator content="blast2html; see https://github.com/thehyve/blast2html/">
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	11
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	12 <title>Blast output</title>
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	13
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	14 <style>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	15 body {
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	16 color: #333333;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	17 font-family: Arial,Sans-Serif;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	18 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	19
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	20 :link {
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	21 color: #336699;
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	22 }
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	23
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	24 .right {
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	25 float: right;
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	26 }
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	27
26 eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	28 /* Galaxy with html sanitization enabled strips the header of this html page. If so, show the user a warning.*/
eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	29 #strip_html_warning {
eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	30 display: none;
eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	31 }
eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	32
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	33 #content {
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	34 margin: 0 2em;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	35 padding: 0.5em;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	36 border: 1px solid #888888;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	37 background-color: #d3dff5;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	38 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	39
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	40 h1, h2, h3, h4, h5, h6 {
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	41 color: #2A6979;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	42 font-family: arial,verdana,sans-serif;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	43 letter-spacing: -1px;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	44 margin: 1.2em 0 0.3em;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	45 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	46
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	47 h1 {
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	48 font-size: 200%;
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	49 }
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	50
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	51 h2 {
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	52 font-size: 150%;
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	53 }
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	54
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	55 h1, h2 {
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	56 border-bottom: 1px solid #CCCCCC;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	57 padding-bottom: 0.1em;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	58 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	59
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	60 h3 {
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	61 font-size: 120%;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	62 font-weight: bold;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	63 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	64
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	65 h5.darkHeader {
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	66 color: #4D4D4D;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	67 letter-spacing: 0;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	68 font-weight: bold;
113 5d3840a1635e adjust header size Jan Kanis <jan.code@jankanis.nl> parents: 112 diff changeset	69 font-size: 108%;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	70 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	71
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	72 #nodata {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	73 font-weight: bold;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	74 }
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	75
21 9596fea636bb style changes Jan Kanis <jan.code@jankanis.nl> parents: 20 diff changeset	76 .index {
9596fea636bb style changes Jan Kanis <jan.code@jankanis.nl> parents: 20 diff changeset	77 margin-bottom: 3em;
9596fea636bb style changes Jan Kanis <jan.code@jankanis.nl> parents: 20 diff changeset	78 }
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	79 .index div.indexentry {
21 9596fea636bb style changes Jan Kanis <jan.code@jankanis.nl> parents: 20 diff changeset	80 margin: 1.2em 1.6em;
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	81 font-weight: bold;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	82 font-size: 100%;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	83 }
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	84
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	85 .headerdata {
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	86 font-size: 90%;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	87 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	88 .headerdata .param {
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	89 font-weight: bold;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	90 text-align: right;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	91 padding: 0 1em;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	92 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	93
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	94 .grey {
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	95 background-color: #eeeeee;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	96 border: 1px solid #cccccc;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	97 padding: 1em;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	98 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	99
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	100 .white {
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	101 background-color: white;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	102 border: 1px solid #cccccc;
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	103 padding: 1.5em 2%;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	104 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	105
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	106 .graphicrow {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	107 clear: left;
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	108 width: 100%;
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	109 }
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	110
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	111 .graphicitem {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	112 float: left;
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	113 }
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	114
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	115
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	116
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	117 .graphics .grey {
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	118 text-align: center;
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	119 }
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	120
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	121 .graphic {
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	122 background-color: white;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	123 border: 2px solid black;
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	124 padding: 1.5em;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	125 margin: auto;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	126 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	127
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	128 .centered, .defline, div.legend, div.tablewrapper {
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	129 margin-left: auto;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	130 margin-right: auto;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	131 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	132
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	133 .defline {
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	134 background-color: white;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	135 border: 1px solid black;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	136 margin: .5em auto;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	137 padding-left: .2em;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	138 padding-right: .2em;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	139 max-width: 50em;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	140 text-align: left;
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	141 height: 2.8em;
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	142 overflow: hidden;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	143 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	144
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	145 div.legend {
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	146 max-width: 40em;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	147 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	148 div.legend div {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	149 width: 100%;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	150 color: white;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	151 font-weight: bold;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	152 border-spacing: 0;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	153 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	154 div.legend div .graphicitem {
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	155 width: 20%;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	156 padding: 0;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	157 margin: 0;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	158 border: none;
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	159 }
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	160
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	161 div.tablewrapper {
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	162 width: 50%;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	163 min-width: 60em;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	164 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	165
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	166 /* For small widths we give the graphic 100% */
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	167 @media (max-width: 72.5em) {
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	168 div.tablewrapper {
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	169 width: 100%;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	170 min-width: 0px;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	171 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	172 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	173
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	174 .scale {
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	175 width: 100%;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	176 margin: .5em 0;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	177 font-weight: bold;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	178 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	179 .scale div {
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	180 color: red;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	181 text-align: left;
6 d20ce91e1297 slight update Jan Kanis <jan.code@jankanis.nl> parents: 5 diff changeset	182 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	183 .scale .graphicrow {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	184 margin: .5em 0 .5em 0;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	185 color: white;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	186 }
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	187 .scale .graphicitem {
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	188 position: relative;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	189 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	190 .scale .graphicitem div {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	191 margin: 0 1px;
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	192 padding: 0 2px;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	193 text-align: right;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	194 background-color: red;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	195 color: white;
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	196 }
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	197 .scale .graphicitem:first-child div {
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	198 margin-left: 0px;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	199 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	200 .scale .graphicitem:last-child div {
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	201 margin-right: 0px;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	202 }
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	203 .scale .graphicitem .lastlabel {
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	204 position: absolute;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	205 top: 0px;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	206 left: 100%;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	207 background-color: transparent;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	208 color: red;
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	209 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	210
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	211 a.matchresult {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	212 display: block;
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	213 margin: 0;
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	214 padding: 0;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	215 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	216 div.matchrow {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	217 margin-top: 4px;
6 d20ce91e1297 slight update Jan Kanis <jan.code@jankanis.nl> parents: 5 diff changeset	218 }
8 beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	219 div.matchrow, div.matchitem {
beb83da5a6b7 div-ified graphics Jan Kanis <jan.code@jankanis.nl> parents: 7 diff changeset	220 height: 4px;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	221 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	222
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	223
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	224 table.descriptiontable {
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	225 font-size: 85%;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	226 border: 1px solid #97b0c8;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	227 border-spacing: 0;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	228 color: #222222;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	229 line-height: 1.3em;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	230 background-color: white;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	231 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	232 table.descriptiontable col:first-child {
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	233 width: 100%;
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	234 }
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	235 table.descriptiontable tr:hover {
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	236 background-color: #D5DEE3;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	237 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	238 table.descriptiontable th {
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	239 color: #14376C;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	240 font-weight: normal;
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	241 background-color: #F0F0F0;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	242 background: linear-gradient(#FFFFFF, #F0F0F0);
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	243 border-bottom: 1px solid #D4DFE9;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	244 border-right: 1px solid #CFCFCF;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	245 border-left: 0px solid black;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	246 border-top: 0px solid black;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	247 }
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	248 table.descriptiontable td {
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	249 overflow: hidden;
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	250 text-align: center;
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	251 padding: .4em .8em;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	252 }
9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	253 table.descriptiontable td div {
9 bbdc8fb0de2b fix descriptiontable width Jan Kanis <jan.code@jankanis.nl> parents: 8 diff changeset	254 width: 1em;
bbdc8fb0de2b fix descriptiontable width Jan Kanis <jan.code@jankanis.nl> parents: 8 diff changeset	255 overflow: visible;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	256 white-space: nowrap;
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	257 text-align: left;
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	258 }
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	259
7 9e7927673089 intermediate commit before converting some tables to divs Jan Kanis <jan.code@jankanis.nl> parents: 6 diff changeset	260
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	261
17 8e61627a87f1 make html more semantic Jan Kanis <jan.code@jankanis.nl> parents: 16 diff changeset	262 .alignments .white {
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	263 padding: 1.5em 1em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	264 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	265
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	266 .alignment {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	267 border-top: 1px solid black;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	268 padding-left: 1em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	269 padding-right: 1em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	270 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	271
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	272 div.linkheader {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	273 padding-top: .2em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	274 font-size: 85%;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	275 color: #14376C;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	276 }
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	277 div.linkheader a.linkheader {
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	278 margin-right: 1em;
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	279 }
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	280 div.linkheader .right a {
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	281 text-decoration: none;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	282 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	283
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	284 .title .hittitle {
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	285 color: #222222;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	286 margin-bottom: .3em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	287 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	288 .title .titleinfo {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	289 font-size: 80%;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	290 margin-top: 0;
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	291 margin-bottom: .3em;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	292 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	293 .title .titleinfo .b {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	294 color: #606060;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	295 font-weight: bold;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	296 font-size: 90%;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	297 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	298
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	299 .moretitles {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	300 margin: 1.2em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	301 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	302 .moretitles .titleinfo {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	303 margin: 0;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	304 padding: 0;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	305 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	306 .moretitles .hittitle {
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	307 margin: .4em 0 .2em 0;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	308 padding: 0;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	309 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	310
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	311 a.showmoretitles {
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	312 font-size: 75%;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	313 color: #336699;
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	314 font-weight: bold;
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	315 margin-top: 0;
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	316 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	317 a.showmoretitles:hover {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	318 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	319
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	320 .hotspot {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	321 color: #606060;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	322 font-family: verdana, arial, sans-serif;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	323 margin-bottom: 2.5em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	324 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	325
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	326 .hotspot p.range {
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	327 font-size: 70%;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	328 margin-top: 0;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	329 margin-top: 1em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	330 margin-bottom: .2em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	331 }
12 a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	332 .hotspot p.range span.range {
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	333 font-weight: bold;
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	334 }
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	335 .hotspot p.range a.range {
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	336 margin-left: .5em;
a459c754cdb5 add links, refactor, proper commandline arguments Jan Kanis <jan.code@jankanis.nl> parents: 11 diff changeset	337 }
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	338
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	339 table.hotspotstable {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	340 border-top: 1px solid;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	341 border-bottom: 1px solid;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	342 text-align: left;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	343 border-collapse: collapse;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	344 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	345 table.hotspotstable th, table.hotspotstable td {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	346 padding: .1em 1em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	347 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	348 table.hotspotstable th {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	349 font-size: 70%;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	350 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	351 table.hotspotstable td {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	352 min-width: 7em;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	353 color: #222222;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	354 font-size: 80%;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	355 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	356
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	357 pre.alignmentgraphic {
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	358 color: #222222;
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	359 }
7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	360
23 6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	361 footer {
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	362 text-align: center;
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	363 color: #cccccc;
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	364 font-size: 70%;
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	365 margin-top: 1em;
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	366 }
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	367 footer :link {
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	368 color: #5588cc;
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	369 }
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	370
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	371 </style>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	372
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	373 <script type="text/javascript">
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	374 function toggle_visibility(id) {
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	375 var e = document.getElementById(id);
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	376 if(e.style.display != 'block')
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	377 e.style.display = 'block';
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	378 else
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	379 e.style.display = 'none';
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	380 }
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	381 </script>
2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	382
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	383 </head>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	384
11 7660519f2dc9 proper layout for alignments, added some links Jan Kanis <jan.code@jankanis.nl> parents: 10 diff changeset	385
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	386 <body>
27 4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	387
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	388 <div id="strip_html_warning">
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	389 <!-- This div should be hidden by the header css block. Galaxy
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	390 strips all css, breaking this page but making this warning
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	391 visible. This warning contains some ugly old skool tabular html
4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	392 layout that is not stripped. -->
124 6719353162b0 change sanitize_all_html warning style Jan Kanis <jan.code@jankanis.nl> parents: 118 diff changeset	393 <table bgcolor="#FFE5C9" frame="border"><tr><td><font color="red"><b>
6719353162b0 change sanitize_all_html warning style Jan Kanis <jan.code@jankanis.nl> parents: 118 diff changeset	394 <font size=5><center>This html page seems to have been stripped by Galaxy.</center></font></font>
27 4e6ac737ba17 improve the galaxy html stripping warning; make sure the tool can find the template from within galaxy Jan Kanis <jan.code@jankanis.nl> parents: 26 diff changeset	395 Disable Galaxy's html sanitization feature to view the full page (see <font face=monospace>sanitize_all_html</font> in your galaxy's universe_wsgi.ini), or download this page instead of viewing it in Galaxy.
124 6719353162b0 change sanitize_all_html warning style Jan Kanis <jan.code@jankanis.nl> parents: 118 diff changeset	396 </b></td></tr></table>
26 eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	397 </div>
eee23a36c582 add a warning if galaxy strips the html header/stylesheet Jan Kanis <jan.code@jankanis.nl> parents: 24 diff changeset	398
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	399 <div id=content>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	400
110 e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	401 <section class=header>
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	402
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	403 <h1>Nucleotide Blast results</h1>
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	404
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	405 <table class=headerdata>
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	406 {% for param, value in params %}
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	407 <tr><td class=param>{{param}}:</td><td>{{value}}</td></tr>
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	408 {% endfor %}
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	409 </table>
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	410
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	411 </section>
e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	412
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	413 {% if not blast.BlastOutput_iterations.findall('Iteration') %}
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	414 <section class=nodata>
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	415 <h2>No data</h2>
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	416 <div class=grey>
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	417 No matches
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	418 </div>
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	419 </section>
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	420
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	421 {% else %}
7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	422
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	423 {% if blast.BlastOutput_iterations.findall('Iteration') \| length > 1 %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	424 <section class=index>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	425 <h2>Queries</h2>
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	426
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	427 {% for result in blast.BlastOutput_iterations.Iteration %}
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	428 <div class=indexentry><a href="#match{{result\|nodeid}}">
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	429 {{result['Iteration_query-ID']}}: {{result['Iteration_query-def']}}
118 7f3f8c10f44b fix for Rikilt issues 8, 11, 12, 14 Jan Kanis <jan.code@jankanis.nl> parents: 115 diff changeset	430 ({{result\|len}} letters, {{result\|hits\|length}} hits)
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	431 </a></div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	432 {% endfor %}
21 9596fea636bb style changes Jan Kanis <jan.code@jankanis.nl> parents: 20 diff changeset	433
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	434 </section>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	435 {% endif %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	436
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	437 {% for result in blast.BlastOutput_iterations.Iteration %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	438
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	439 <section class=match id=match{{result\|nodeid}}>
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	440
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	441 <h2>Nucleotide Sequence ({{result\|len}} letters)</h2>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	442
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	443 <section class=header>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	444
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	445 <table class=headerdata>
110 e17aae23cc1c report query parameters for each query Jan Kanis <jan.code@jankanis.nl> parents: 96 diff changeset	446 {% for param, value in result\|params %}
23 6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	447 <tr><td class=param>{{param}}:</td><td>{{value}}</td></tr>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	448 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	449 </table>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	450
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	451 </section>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	452
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	453 {% set hits = result\|hits %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	454 {% if not hits %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	455 <section>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	456 <h3>No Hits</h3>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	457 <div class=grey>
24 c8347745bbad use Iteration_message tag; also work with unexpected Hit_id values Jan Kanis <jan.code@jankanis.nl> parents: 23 diff changeset	458 <table class=headerdata>
c8347745bbad use Iteration_message tag; also work with unexpected Hit_id values Jan Kanis <jan.code@jankanis.nl> parents: 23 diff changeset	459 <tr><td class=param>Message:</td><td>{{result.Iteration_message}}</td></tr>
c8347745bbad use Iteration_message tag; also work with unexpected Hit_id values Jan Kanis <jan.code@jankanis.nl> parents: 23 diff changeset	460 </table>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	461 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	462 </section>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	463 {% else %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	464
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	465 <section class=graphics>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	466 <h3>Graphic Summary</h3>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	467
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	468 <div class=grey>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	469 <h4 class=centered>Distribution of {{result\|length}} Blast Hits on the Query Sequence</h4>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	470
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	471 <div class=defline id=defline{{result\|nodeid}}>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	472 Mouse-over to show defline and scores, click to show alignments
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	473 </div>
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	474
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	475 <div class=graphic>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	476 <h5 class=darkHeader>Color key for alignment scores</h5>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	477 <div class=legend><div class=graphicrow>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	478 <div class=graphicitem style="background-color: {{colors[0]}}"><40</div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	479 <div class=graphicitem style="background-color: {{colors[1]}}">40–50</div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	480 <div class=graphicitem style="background-color: {{colors[2]}}">50–80</div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	481 <div class=graphicitem style="background-color: {{colors[3]}}">80–200</div>
118 7f3f8c10f44b fix for Rikilt issues 8, 11, 12, 14 Jan Kanis <jan.code@jankanis.nl> parents: 115 diff changeset	482 <div class=graphicitem style="background-color: {{colors[4]}}">≥200</div>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	483 </div></div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	484 <div style="clear: left"></div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	485
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	486 <div class=tablewrapper>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	487
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	488 <div class=scale>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	489 <div>query:</div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	490 <div class=graphicrow>
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	491 <div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	492 {% for s in result\|queryscale %}
76 7d0d46168fd5 Format all numbers in a predictable way Jan Kanis <jan.code@jankanis.nl> parents: 75 diff changeset	493 <div class=graphicitem style="width: {{s.width\|numfmt}}%">
20 53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	494 {% if s.width > 3.0 %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	495 <div>{{s.label}}</div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	496 {% else %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	497 <div> </div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	498 <div class=lastlabel>{{s.label}}</div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	499 {% endif %}
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	500 </div>
53cd304c5f26 Add index for multiple results; fix layout of query ruler for edge case Jan Kanis <jan.code@jankanis.nl> parents: 19 diff changeset	501 {% endfor %}
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	502 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	503 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	504 <div style="clear: left"></div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	505 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	506
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	507 {% for line in result\|match_colors %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	508 <a class=matchresult
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	509 href="#hit{{line.hit\|nodeid}}"
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	510 onmouseover='document.getElementById("defline{{result\|nodeid}}").innerHTML="{{line.defline\|js_string_escape}}"'
4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	511 onmouseout='document.getElementById("defline{{result\|nodeid}}").innerHTML="Mouse-over to show defline and scores, click to show alignments"'
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	512 title="{{line.defline}}">
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	513 <div class="matchrow graphicrow">
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	514 {% for hit in line.colors %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	515 <div class="matchitem graphicitem"
76 7d0d46168fd5 Format all numbers in a predictable way Jan Kanis <jan.code@jankanis.nl> parents: 75 diff changeset	516 style="background-color: {{hit[1]}}; width: {{hit[0]\|numfmt}}%"></div>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	517 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	518 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	519 </a>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	520
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	521 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	522 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	523 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	524 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	525 </section>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	526
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	527
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	528
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	529 <section class=descriptions>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	530 <h3>Descriptions</h3>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	531
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	532 <div class=grey><div class=white>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	533 <h5 class=darkHeader>Sequences producing significant alignments:</h5>
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	534
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	535 <table class=descriptiontable>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	536 <col/><col/><col/><col/><col/><col/><col/>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	537 <tr>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	538 <th>Description</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	539 <th>Max score</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	540 <th>Total score</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	541 <th>Query cover</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	542 <th>E value</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	543 <th>Ident</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	544 <th>Accession</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	545 </tr>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	546 {% for hit in result\|hit_info %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	547 <tr>
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	548 <td><div><a href="#hit{{hit.hit\|nodeid}}"
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	549 title="{{hit.title}}"
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	550 id="description{{hit.hit\|nodeid}}">
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	551 {{hit.title}}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	552 </a></div></td>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	553 <td>{{hit.maxscore}}</td>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	554 <td>{{hit.totalscore}}</td>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	555 <td>{{hit.cover}}</td>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	556 <td>{{hit.e_value}}</td>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	557 <td>{{hit.ident}}</td>
95 4378d11f0ed7 implement configurable gene bank links Jan Kanis <jan.code@jankanis.nl> parents: 76 diff changeset	558 <td>{{hit.hit\|genelink(hit.hit.Hit_accession)}}</td>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	559 </tr>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	560 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	561 </table>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	562
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	563 </div></div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	564 </section>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	565
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	566
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	567
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	568 <section class=alignments>
111 7aa28753d7b3 create document-wide h1 header, put other headers one size down Jan Kanis <jan.code@jankanis.nl> parents: 110 diff changeset	569 <h3>Alignments</h3>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	570
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	571 <div class=grey><div class=white>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	572 {% for hit in hits %}
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	573 <div class=alignment id=hit{{hit\|nodeid}}>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	574
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	575 <div class=linkheader>
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	576 <div class=right><a href="#description{{hit\|nodeid}}">Descriptions</a></div>
115 0c2a03f9740b make external gene bank name configurable Jan Kanis <jan.code@jankanis.nl> parents: 113 diff changeset	577 {{ hit\|genelink(text_from='dbname', cssclass='linkheader', display_nolink=False) }}
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	578 </div>
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	579
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	580 <div class=title>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	581 <p class=hittitle>{{hit\|firsttitle}}</p>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	582 <p class=titleinfo>
95 4378d11f0ed7 implement configurable gene bank links Jan Kanis <jan.code@jankanis.nl> parents: 76 diff changeset	583 <span class=b>Sequence ID:</span> {{ hit\|genelink }}
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	584 <span class=b>Length:</span> {{hit.Hit_len}}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	585 <span class=b>Number of Matches:</span> {{hit.Hit_hsps.Hsp\|length}}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	586 </p>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	587 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	588
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	589 {% if hit\|othertitles\|length %}
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	590 <a class=showmoretitles onclick="toggle_visibility('moretitles{{hit\|nodeid\|js_string_escape}}'); return false;" href=''>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	591 See {{hit\|othertitles\|length}} more title(s)
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	592 </a>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	593
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	594 <div class=moretitles id=moretitles{{hit\|nodeid}} style="display: none">
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	595 {% for title in hit\|othertitles %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	596 <div class=title>
96 02b795b784e1 fix bug; add comments Jan Kanis <jan.code@jankanis.nl> parents: 95 diff changeset	597 <p class=hittitle>{{title.Hit_def}}</p>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	598 <p class=titleinfo>
95 4378d11f0ed7 implement configurable gene bank links Jan Kanis <jan.code@jankanis.nl> parents: 76 diff changeset	599 <span class=b>Sequence ID:</span> {{ title\|genelink }}
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	600 </p>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	601 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	602 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	603 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	604 {% endif %}
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	605
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	606 {% for hsp in hit.Hit_hsps.Hsp %}
53 4217bb9cf1d3 depend on python 3; fix internal links with multiple iterations Jan Kanis <jan.code@jankanis.nl> parents: 33 diff changeset	607 <div class=hotspot id=hotspot{{hsp\|nodeid}}>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	608 <p class=range>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	609 <span class=range>Range {{hsp.Hsp_num}}: {{hsp['Hsp_hit-from']}} to {{hsp['Hsp_hit-to']}}</span>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	610 </p>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	611
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	612 <table class=hotspotstable>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	613 <tr>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	614 <th>Score</th><th>Expect</th><th>Identities</th><th>Gaps</th><th>Strand</th>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	615 </tr>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	616 <tr>
118 7f3f8c10f44b fix for Rikilt issues 8, 11, 12, 14 Jan Kanis <jan.code@jankanis.nl> parents: 115 diff changeset	617 <td>{{hsp['Hsp_bit-score']}} bits ({{hsp.Hsp_score}})</td>
7f3f8c10f44b fix for Rikilt issues 8, 11, 12, 14 Jan Kanis <jan.code@jankanis.nl> parents: 115 diff changeset	618 <td>{{hsp.Hsp_evalue}}</td>
7f3f8c10f44b fix for Rikilt issues 8, 11, 12, 14 Jan Kanis <jan.code@jankanis.nl> parents: 115 diff changeset	619 <td>{{ hsp.Hsp_identity }}/{{ hsp\|len }} ({{
75 4d2c25baf5a3 Fix rounding errors Jan Kanis <jan.code@jankanis.nl> parents: 73 diff changeset	620 ((hsp.Hsp_identity\|float)/hsp\|len) \| fmt('.0%') }})</td>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	621 <td>{{ hsp.Hsp_gaps }}/{{ hsp\|len
118 7f3f8c10f44b fix for Rikilt issues 8, 11, 12, 14 Jan Kanis <jan.code@jankanis.nl> parents: 115 diff changeset	622 }} ({{ ((hsp.Hsp_gaps\|float) / hsp\|len) \| fmt('.0%') }})</td>
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	623 <td>{{ hsp['Hsp_query-frame']\|asframe }}/{{ hsp['Hsp_hit-frame']\|asframe }}</td>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	624 </tr>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	625 </table>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	626
67 19c48f2ec775 wrap alignments if they are too long Jan Kanis <jan.code@jankanis.nl> parents: 53 diff changeset	627 {% for alignment_line in hsp\|alignment_pre %}
19c48f2ec775 wrap alignments if they are too long Jan Kanis <jan.code@jankanis.nl> parents: 53 diff changeset	628 <pre class=alignmentgraphic>{{alignment_line}}</pre>
19c48f2ec775 wrap alignments if they are too long Jan Kanis <jan.code@jankanis.nl> parents: 53 diff changeset	629 {% endfor %}
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	630 </div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	631 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	632
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	633 </div>
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	634
19 67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	635 {% endfor %}
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	636 </div></div>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	637 </section>
67ddcb807b7d make it work with multiple queries Jan Kanis <jan.code@jankanis.nl> parents: 17 diff changeset	638 {% endif %}
23 6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	639 </section>
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	640 {% endfor %}
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	641 {% endif %}
10 2fbdf2eb27b4 All data is displayed now, still some formatting to do Jan Kanis <jan.code@jankanis.nl> parents: 9 diff changeset	642
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	643 </div>
23 6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	644
6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	645 <footer>
33 3bb5da68305e add test update script, add url to github page Jan Kanis <jan.code@jankanis.nl> parents: 27 diff changeset	646 This page was generated by <a href="https://github.com/thehyve/blast2html/">blast2html</a>.
23 6995a6f34f3f fix sectioning, add footer Jan Kanis <jan.code@jankanis.nl> parents: 22 diff changeset	647 </footer>
5 1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	648 </body>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	649 </html>
1df2bfce5c24 first features are working, partial match table Jan Kanis <jan.code@jankanis.nl> parents: diff changeset	650
16 db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	651 {#
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	652 Local Variables:
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	653 tab-width: 2
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	654 indent-tabs-mode: nil
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	655 End:
db7e4ee3be03 fix validation, reindent Jan Kanis <jan.code@jankanis.nl> parents: 13 diff changeset	656 #}

Mercurial > repos > jankanis > blast2html

annotate blast2html.html.jinja @ 127:532aa200dbe9