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comparison sappDocker/annotation.xml @ 31:957156367442 draft

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author jjkoehorst
date Wed, 29 Jun 2016 01:36:58 -0400
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30:0a947cb25a3d 31:957156367442
1 <tool id="DAnnotation" name="Protein annotation" version="0.1">
2 <description>Protein annotation</description>
3 <requirements>
4 <container type="docker">jjkoehorst/sappdocker:PROTEINANNOTATION</container>
5 </requirements>
6 <command interpreter="docker">java -jar /proteinannotation/target/proteinAnnotation-0.0.1-SNAPSHOT-jar-with-dependencies.jar '-input' '$input' '-output' '$output' -format TURTLE</command>
7 <inputs>
8 <param format="ttl" label="genome ttl file" name="input" type="data"/>
9 </inputs>
10 <outputs>
11 <data format="ttl" label="Annotation: ${input.name}" name="output"/>
12 </outputs>
13 </tool>