Mercurial > repos > jjkoehorst > sapp
annotate sappDocker/annotation.xml @ 31:957156367442 draft
Uploaded
| author | jjkoehorst |
|---|---|
| date | Wed, 29 Jun 2016 01:36:58 -0400 |
| parents | |
| children |
| rev | line source |
|---|---|
| 31 | 1 <tool id="DAnnotation" name="Protein annotation" version="0.1"> |
| 2 <description>Protein annotation</description> | |
| 3 <requirements> | |
| 4 <container type="docker">jjkoehorst/sappdocker:PROTEINANNOTATION</container> | |
| 5 </requirements> | |
| 6 <command interpreter="docker">java -jar /proteinannotation/target/proteinAnnotation-0.0.1-SNAPSHOT-jar-with-dependencies.jar '-input' '$input' '-output' '$output' -format TURTLE</command> | |
| 7 <inputs> | |
| 8 <param format="ttl" label="genome ttl file" name="input" type="data"/> | |
| 9 </inputs> | |
| 10 <outputs> | |
| 11 <data format="ttl" label="Annotation: ${input.name}" name="output"/> | |
| 12 </outputs> | |
| 13 </tool> |