Mercurial > repos > jjkoehorst > sapp
view rnaseq/cutadapt/test-data/gff2bed_out3.bed @ 11:a712b378e090
cutadapt added
author | jjkoehorst <jasperkoehorst@gmail.com> |
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date | Sat, 21 Feb 2015 16:33:42 +0100 |
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ctgA 22131 24633 my_feature 0 + ctgA 46989 48410 my_feature 0 - ctgA 44704 47713 my_feature 0 - ctgA 36648 40440 my_feature 0 - ctgA 23071 23185 my_feature 0 + ctgA 37241 38653 my_feature 0 + ctgA 37496 40559 motif 0 - ctgA 36033 38167 my_feature 0 + ctgA 28331 30033 motif 0 - ctgA 4714 5968 my_feature 0 - ctgA 48252 48366 motif 0 + ctgA 999 20000 BAC 0 + ctgA 19499 20000 right_end_read 0 - ctgA 999 1500 left_end_read 0 + ctgA 13800 14007 motif 0 - ctgA 1049 9000 coding 0 + ctgA 1200 1500 CDS 0 + ctgA 2999 3902 CDS 0 + ctgA 4999 5500 CDS 0 + ctgA 6999 7608 CDS 0 + ctgA 1049 9000 processed_transcript 0 + ctgA 1049 1200 5'-UTR 0 + ctgA 7608 9000 3'-UTR 0 + ctgA 5409 7503 match 0 - ctgA 6999 7503 HSP 0 - ctgA 5409 5500 HSP 0 - ctgA 46011 48851 motif 0 + ctgA 6884 8999 match 0 - ctgA 8305 8999 HSP 0 - ctgA 8054 8080 HSP 0 - ctgA 7409 7737 HSP 0 - ctgA 6884 7241 HSP 0 - ctgA 13279 16394 my_feature 0 + ctgA 29770 32937 match 0 + ctgA 29770 29942 HSP 0 + ctgA 30041 30340 HSP 0 + ctgA 30809 31307 HSP 0 + ctgA 31760 31984 HSP 0 + ctgA 32373 32937 HSP 0 + ctgA 36615 37227 match 0 - ctgA 37207 37227 HSP 0 - ctgA 36615 37057 HSP 0 - ctgA 11910 15561 motif 0 + ctgA 1049 3202 match 0 + ctgA 1049 1500 HSP 0 + ctgA 2999 3202 HSP 0 + ctgA 15395 16159 motif 0 + ctgA 1149 7200 match 0 + ctgA 1149 1500 HSP 0 + ctgA 4999 5500 HSP 0 + ctgA 6999 7200 HSP 0 + ctgA 1049 7300 match 0 + ctgA 1049 1500 HSP 0 + ctgA 4999 5500 HSP 0 + ctgA 6999 7300 HSP 0 + ctgA 19156 22915 my_feature 0 - ctgA 7999 9000 match 0 - ctgA 7999 9000 HSP 0 - ctgA 28341 28447 motif 0 - ctgA 17666 17690 motif 0 + ctgA 44400 45925 trace 0 + ctgA 26121 34466 match 0 + ctgA 26121 26126 HSP 0 + ctgA 26496 26869 HSP 0 + ctgA 27200 27325 HSP 0 + ctgA 27371 27433 HSP 0 + ctgA 27564 27565 HSP 0 + ctgA 27812 28091 HSP 0 + ctgA 28092 28201 HSP 0 + ctgA 28328 28377 HSP 0 + ctgA 28828 29194 HSP 0 + ctgA 29516 29702 HSP 0 + ctgA 29712 30061 HSP 0 + ctgA 30328 30774 HSP 0 + ctgA 30807 31306 HSP 0 + ctgA 31515 31729 HSP 0 + ctgA 31752 32154 HSP 0 + ctgA 32594 32696 HSP 0 + ctgA 32891 32901 HSP 0 + ctgA 33126 33388 HSP 0 + ctgA 33438 33443 HSP 0 + ctgA 33758 34209 HSP 0 + ctgA 34400 34466 HSP 0 + ctgA 0 50000 contig 0 + ctgA 41136 47829 match 0 - ctgA 47448 47829 HSP 0 - ctgA 46815 46992 HSP 0 - ctgA 46091 46318 HSP 0 - ctgA 45789 46022 HSP 0 - ctgA 45230 45488 HSP 0 - ctgA 44762 45030 HSP 0 - ctgA 44064 44556 HSP 0 - ctgA 43394 43811 HSP 0 - ctgA 42889 43270 HSP 0 - ctgA 42056 42474 HSP 0 - ctgA 41753 41948 HSP 0 - ctgA 41136 41318 HSP 0 - ctgA 12530 15870 match 0 + ctgA 12530 12895 HSP 0 + ctgA 13121 13449 HSP 0 + ctgA 13451 13745 HSP 0 + ctgA 13907 13965 HSP 0 + ctgA 13997 14488 HSP 0 + ctgA 14563 14899 HSP 0 + ctgA 15184 15276 HSP 0 + ctgA 15638 15736 HSP 0 + ctgA 15744 15870 HSP 0 + ctgA 7499 8000 match 0 - ctgA 7499 8000 HSP 0 - ctgA 1299 9000 coding 0 + ctgA 3300 3902 CDS 0 + ctgA 4999 5500 CDS 0 + ctgA 6999 7600 CDS 0 + ctgA 1299 9000 processed_transcript 0 + ctgA 1299 1500 5'-UTR 0 + ctgA 2999 3300 5'-UTR 0 + ctgA 7600 9000 3'-UTR 0 + ctgA 26502 35904 match 0 - ctgA 35641 35904 HSP 0 - ctgA 35332 35507 HSP 0 - ctgA 34604 34983 HSP 0 - ctgA 34243 34313 HSP 0 - ctgA 33437 33868 HSP 0 - ctgA 33052 33325 HSP 0 - ctgA 32207 32680 HSP 0 - ctgA 32009 32057 HSP 0 - ctgA 31420 31817 HSP 0 - ctgA 31231 31236 HSP 0 - ctgA 30464 30798 HSP 0 - ctgA 30107 30216 HSP 0 - ctgA 29512 29647 HSP 0 - ctgA 28776 29058 HSP 0 - ctgA 28224 28316 HSP 0 - ctgA 27886 28076 HSP 0 - ctgA 27447 27860 HSP 0 - ctgA 27171 27185 HSP 0 - ctgA 26502 26799 HSP 0 - ctgA 49405 50000 match 0 + ctgA 49405 49476 HSP 0 + ctgA 49761 50000 HSP 0 + ctgA 1049 9000 gene 0 + ctgA 33324 35791 motif 0 + ctgA 31784 32359 match 0 + ctgA 31784 31939 HSP 0 + ctgA 32328 32359 HSP 0 +