Mercurial > repos > jjohnson > qiime
annotate per_library_stats.xml @ 0:e5c3175506b7 default tip
Initial tool configs for qiime, most need work.
author | Jim Johnson <jj@umn.edu> |
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date | Sun, 17 Jul 2011 10:30:11 -0500 |
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e5c3175506b7
Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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1 <tool id="per_library_stats" name="per_library_stats" version="1.2.0"> |
e5c3175506b7
Initial tool configs for qiime, most need work.
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2 <description>Calculate per library statistics</description> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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3 <requirements> |
e5c3175506b7
Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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4 <requirement type="binary">per_library_stats.py</requirement> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
parents:
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5 </requirements> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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6 <command interpreter="python"> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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7 qiime_wrapper.py |
e5c3175506b7
Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
parents:
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8 --galaxy_tmpdir='$__new_file_path__' |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
parents:
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9 per_library_stats.py |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
parents:
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10 --otu_table_fp=$otu_table_fp |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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11 </command> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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12 <inputs> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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13 <param name="otu_table_fp" type="data" format="txt" label="otu_table_fp" |
e5c3175506b7
Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
parents:
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14 help="path to the input OTU table (i.e., the output from make_otu_table.py) [REQUIRED]"/> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
parents:
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15 </inputs> |
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16 <outputs> |
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Jim Johnson <jj@umn.edu>
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17 |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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18 </outputs> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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19 <tests> |
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Initial tool configs for qiime, most need work.
Jim Johnson <jj@umn.edu>
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20 </tests> |
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Initial tool configs for qiime, most need work.
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21 <help> |
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Initial tool configs for qiime, most need work.
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22 |
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23 </help> |
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Initial tool configs for qiime, most need work.
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24 </tool> |
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25 |